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The map label for this gene is ydgI [H]

Identifier: 157370827

GI number: 157370827

Start: 2845183

End: 2846574

Strand: Direct

Name: ydgI [H]

Synonym: Spro_2587

Alternate gene names: 157370827

Gene position: 2845183-2846574 (Clockwise)

Preceding gene: 157370826

Following gene: 157370829

Centisome position: 52.22

GC content: 55.89

Gene sequence:

>1392_bases
TTGGAAAAAAAACTAGGTCTTACCGCGTTAACCGCATTGGTGCTGAGCTCAATGCTGGGCGCCGGGGTTTTCAGCCTGCC
ACAAAACATGGCGCAGGTTGCCAGCCCGGCGGCCCTGCTATTGGGTTGGGCAATCACCGGCGTCGGCATCCTGTTTCTGG
CTTTTGCCATGCTGTTGCTAACCCGCCTGCGTCCCAATCTGGACGGTGGCATCTTTACCTATGCGAAAGAAGGCTTTGGC
GAGCTGGTGGGCTTTTGTTCCGCCTGGGGTTACTGGTTGTGCGCAGTGATCGCCAATGTCTCTTACCTGGTTATCGTGTT
CGCCGCACTGAGTTTATTCACCGATCGCGGCGGAAACGTCATTCTGGGCGATGGCAATACCTGGCAGGCACTACTGGCAG
AGTCAGTATTGCTGTGGATCGTCCATGCGCTGGTGTTGCGCGGCGTGCAAACTGCAGCCAGCATCAATCTGGTGGCAACC
CTGGCCAAGCTATTGCCGCTGGGGATGTTCGCCGTGTTGGCGGCGATGGCGTTCAACATGGACGTCTTTACGCTGGATTT
CCACGGCGTCGCTCTCGGTAAACCGGTGTGGGAACAGGTAAAAAACACCATGCTGATTACCCTGTGGGTATTTATCGGTG
TGGAAGGCGCAGTCGTGGTTTCAGCGCGGGCGCGTCATAAAAAGGATGTCGGCCGTGCAACCATGCTGGCAGTGATCTCC
GCGCTGGCGGTTTACCTGCTGGTGACTTTGTTGTCCCTGGGTGTGGTGCCGCGCAGCGAATTGGCCGAAATGCGCAATCC
TTCCATGGCGGTGCTGATGGTCGATCTGATTGGCCCCTGGGGTGACGTGATTATCGCGGCCGGGCTGATTGTTTCGGTCT
GCGGGGCCTATCTGAGCTGGACGATTATGGCCGCCGAAGTCCCGCTGCTGGCGGCACAACACGGCGCTTTCCCAAAGATT
TTCCGCAAGCAGAACAAAAATCATGCGCCTTCAGCTTCACTGTGGCTGACCAATATTGCCGTGCAGTTCGCACTGGTGCT
GATCTGGCTGACCGGCAGCAATTATAATTCTTTGCTGACTATCGCCTCGGAAATGATCCTGGTGCCTTATTTCCTGGTCG
GTGCCTTCCTGTTTAAGGTGGCAATTCGTCGTCAGGACAAACGGCTGATGTTCGCCGCCACAGGTGCCTGTCTGTACGGT
ATTTGGCTGCTCTACGCTTCTGGGTTAATGCATTTGCTGATGTCGGTGTTGCTGTATGCACCGGGGCTGCTGGTGTTTAT
TTATGCCCGAAGCGGACATAACGACGTCAAGTTGCTGAATCAGCTGGAGAAAGGCAGTATTTTTCTGTTGCTGGTGGCCA
CGGTACCGGCCGGCTGGTTTATGCTGCAGTAG

Upstream 100 bases:

>100_bases
AATTTTTAGGGCTATTGTCTACTCGTTCAGTAATTGTCATTACGTTGTTACTGCCAAGCAGTTCCCTTCCAGTTGTTTAT
TCTGCGCTCAGGATCCGTCA

Downstream 100 bases:

>100_bases
GTGAAAAATGGCCGGGTGGGATCACCCGGTCAGTTACTTTGAGATGTACGCAGGCTGATGGTCATGCGTTCCCCAACCTG
AGAGATAATCACTCCCTCAA

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAQVASPAALLLGWAITGVGILFLAFAMLLLTRLRPNLDGGIFTYAKEGFG
ELVGFCSAWGYWLCAVIANVSYLVIVFAALSLFTDRGGNVILGDGNTWQALLAESVLLWIVHALVLRGVQTAASINLVAT
LAKLLPLGMFAVLAAMAFNMDVFTLDFHGVALGKPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKKDVGRATMLAVIS
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAVLMVDLIGPWGDVIIAAGLIVSVCGAYLSWTIMAAEVPLLAAQHGAFPKI
FRKQNKNHAPSASLWLTNIAVQFALVLIWLTGSNYNSLLTIASEMILVPYFLVGAFLFKVAIRRQDKRLMFAATGACLYG
IWLLYASGLMHLLMSVLLYAPGLLVFIYARSGHNDVKLLNQLEKGSIFLLLVATVPAGWFMLQ

Sequences:

>Translated_463_residues
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAQVASPAALLLGWAITGVGILFLAFAMLLLTRLRPNLDGGIFTYAKEGFG
ELVGFCSAWGYWLCAVIANVSYLVIVFAALSLFTDRGGNVILGDGNTWQALLAESVLLWIVHALVLRGVQTAASINLVAT
LAKLLPLGMFAVLAAMAFNMDVFTLDFHGVALGKPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKKDVGRATMLAVIS
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAVLMVDLIGPWGDVIIAAGLIVSVCGAYLSWTIMAAEVPLLAAQHGAFPKI
FRKQNKNHAPSASLWLTNIAVQFALVLIWLTGSNYNSLLTIASEMILVPYFLVGAFLFKVAIRRQDKRLMFAATGACLYG
IWLLYASGLMHLLMSVLLYAPGLLVFIYARSGHNDVKLLNQLEKGSIFLLLVATVPAGWFMLQ
>Mature_463_residues
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAQVASPAALLLGWAITGVGILFLAFAMLLLTRLRPNLDGGIFTYAKEGFG
ELVGFCSAWGYWLCAVIANVSYLVIVFAALSLFTDRGGNVILGDGNTWQALLAESVLLWIVHALVLRGVQTAASINLVAT
LAKLLPLGMFAVLAAMAFNMDVFTLDFHGVALGKPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKKDVGRATMLAVIS
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAVLMVDLIGPWGDVIIAAGLIVSVCGAYLSWTIMAAEVPLLAAQHGAFPKI
FRKQNKNHAPSASLWLTNIAVQFALVLIWLTGSNYNSLLTIASEMILVPYFLVGAFLFKVAIRRQDKRLMFAATGACLYG
IWLLYASGLMHLLMSVLLYAPGLLVFIYARSGHNDVKLLNQLEKGSIFLLLVATVPAGWFMLQ

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=462, Percent_Identity=76.8398268398268, Blast_Score=703, Evalue=0.0,
Organism=Escherichia coli, GI2367353, Length=456, Percent_Identity=29.3859649122807, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1786908, Length=422, Percent_Identity=26.5402843601896, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790575, Length=377, Percent_Identity=25.1989389920424, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49915; Mature: 49915

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAQVASPAALLLGWAITGVGILFLAFAMLLL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TRLRPNLDGGIFTYAKEGFGELVGFCSAWGYWLCAVIANVSYLVIVFAALSLFTDRGGNV
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ILGDGNTWQALLAESVLLWIVHALVLRGVQTAASINLVATLAKLLPLGMFAVLAAMAFNM
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DVFTLDFHGVALGKPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKKDVGRATMLAVIS
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAVLMVDLIGPWGDVIIAAGLIVSVCGAYLSW
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMAAEVPLLAAQHGAFPKIFRKQNKNHAPSASLWLTNIAVQFALVLIWLTGSNYNSLLT
HHHHHHCCHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHH
IASEMILVPYFLVGAFLFKVAIRRQDKRLMFAATGACLYGIWLLYASGLMHLLMSVLLYA
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGLLVFIYARSGHNDVKLLNQLEKGSIFLLLVATVPAGWFMLQ
CCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCEECC
>Mature Secondary Structure
MEKKLGLTALTALVLSSMLGAGVFSLPQNMAQVASPAALLLGWAITGVGILFLAFAMLLL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TRLRPNLDGGIFTYAKEGFGELVGFCSAWGYWLCAVIANVSYLVIVFAALSLFTDRGGNV
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ILGDGNTWQALLAESVLLWIVHALVLRGVQTAASINLVATLAKLLPLGMFAVLAAMAFNM
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DVFTLDFHGVALGKPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKKDVGRATMLAVIS
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAVLMVDLIGPWGDVIIAAGLIVSVCGAYLSW
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMAAEVPLLAAQHGAFPKIFRKQNKNHAPSASLWLTNIAVQFALVLIWLTGSNYNSLLT
HHHHHHCCHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHH
IASEMILVPYFLVGAFLFKVAIRRQDKRLMFAATGACLYGIWLLYASGLMHLLMSVLLYA
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGLLVFIYARSGHNDVKLLNQLEKGSIFLLLVATVPAGWFMLQ
CCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]