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The map label for this gene is yfeT [C]

Identifier: 157370739

GI number: 157370739

Start: 2743990

End: 2744724

Strand: Direct

Name: yfeT [C]

Synonym: Spro_2499

Alternate gene names: 157370739

Gene position: 2743990-2744724 (Clockwise)

Preceding gene: 157370738

Following gene: 157370740

Centisome position: 50.36

GC content: 49.52

Gene sequence:

>735_bases
ATGTTTACCCATAAAGCCATTGCCGAACTCAATACGCTGGAGTTGATGATTTATAACTACGTCATCAAAAACAAAAACGC
GGTGATGTATATGACCATCCGCGAACTGGCCGAGGCCGCCGGGGTGTCCACCACCACCGTGCTGCGTTTTTGCAAGAAAA
TGGGCTGCGCGGGTTATTCCGAATTCCGTATTCGCTTTAAGTTATATCTTGAGCAAAACGAAGCACCGCCGGTAGACTTT
GGCACCAGCGAAATAATCAGTTTCTTTAAGAGCATTAACAACGACGAATTTAATCAGCTGATTGACCAGGCGGTGCAACA
TATTGCCGCCGCCGAGCGCATTATTTTCGTCGGGGTAAGTACCTCGGGGGCATTAGGGAAATATGGTGCTCGTTTCTTTT
CCAACGTGGGGAAATTCAGCACCCATATTGATGACCCTTATTATCCGGTCAATAGCGACATGTATAAAAGCGCGGTAGCG
ATTATGCTTTCCGTCTCTGGTGAAACCGAAGAGATCCTGCGCCTGGCCAGCCAGTTCAGCCTGCACCACTGCAAAATCGT
CAGCATCACCAACAACGAAACCTCGTCGCTGGCGCGTATGGCGGACTTCAACCTCTCCTATCATGTTCCCCAACAGCTGA
TCGCCGGGCAACATAACATCACCACCCAGATCCCGGTCATTTACATTATCGAAACCATCGGCAAGCGGCTGGGCCATATT
AACGCCGCCAAATAA

Upstream 100 bases:

>100_bases
ACGCGCCTGAATAACAACGAAAACCACGAGCGGGCAACGGCAAAATTTGCTATGTTAGCCCGCTCTGATTAAGGTCTGTT
GTTACTCGCCGGATAGGTCT

Downstream 100 bases:

>100_bases
AACAGCCTGTTTTTTTAATGTGACAAGTTACCCGAACGCTATTTTGTTATATCGTGACATTCTATTCCAGCTTGCTAGTA
TCTTCTCATTACCTTTCATT

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MFTHKAIAELNTLELMIYNYVIKNKNAVMYMTIRELAEAAGVSTTTVLRFCKKMGCAGYSEFRIRFKLYLEQNEAPPVDF
GTSEIISFFKSINNDEFNQLIDQAVQHIAAAERIIFVGVSTSGALGKYGARFFSNVGKFSTHIDDPYYPVNSDMYKSAVA
IMLSVSGETEEILRLASQFSLHHCKIVSITNNETSSLARMADFNLSYHVPQQLIAGQHNITTQIPVIYIIETIGKRLGHI
NAAK

Sequences:

>Translated_244_residues
MFTHKAIAELNTLELMIYNYVIKNKNAVMYMTIRELAEAAGVSTTTVLRFCKKMGCAGYSEFRIRFKLYLEQNEAPPVDF
GTSEIISFFKSINNDEFNQLIDQAVQHIAAAERIIFVGVSTSGALGKYGARFFSNVGKFSTHIDDPYYPVNSDMYKSAVA
IMLSVSGETEEILRLASQFSLHHCKIVSITNNETSSLARMADFNLSYHVPQQLIAGQHNITTQIPVIYIIETIGKRLGHI
NAAK
>Mature_244_residues
MFTHKAIAELNTLELMIYNYVIKNKNAVMYMTIRELAEAAGVSTTTVLRFCKKMGCAGYSEFRIRFKLYLEQNEAPPVDF
GTSEIISFFKSINNDEFNQLIDQAVQHIAAAERIIFVGVSTSGALGKYGARFFSNVGKFSTHIDDPYYPVNSDMYKSAVA
IMLSVSGETEEILRLASQFSLHHCKIVSITNNETSSLARMADFNLSYHVPQQLIAGQHNITTQIPVIYIIETIGKRLGHI
NAAK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 27308; Mature: 27308

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00356 HTH_LACI_1 ; PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTHKAIAELNTLELMIYNYVIKNKNAVMYMTIRELAEAAGVSTTTVLRFCKKMGCAGYS
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHCCCCCH
EFRIRFKLYLEQNEAPPVDFGTSEIISFFKSINNDEFNQLIDQAVQHIAAAERIIFVGVS
HEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEEC
TSGALGKYGARFFSNVGKFSTHIDDPYYPVNSDMYKSAVAIMLSVSGETEEILRLASQFS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHCC
LHHCKIVSITNNETSSLARMADFNLSYHVPQQLIAGQHNITTQIPVIYIIETIGKRLGHI
CCEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
NAAK
CCCC
>Mature Secondary Structure
MFTHKAIAELNTLELMIYNYVIKNKNAVMYMTIRELAEAAGVSTTTVLRFCKKMGCAGYS
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHCCCCCH
EFRIRFKLYLEQNEAPPVDFGTSEIISFFKSINNDEFNQLIDQAVQHIAAAERIIFVGVS
HEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEEC
TSGALGKYGARFFSNVGKFSTHIDDPYYPVNSDMYKSAVAIMLSVSGETEEILRLASQFS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHCC
LHHCKIVSITNNETSSLARMADFNLSYHVPQQLIAGQHNITTQIPVIYIIETIGKRLGHI
CCEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
NAAK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]