| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hisD [H]
Identifier: 157369858
GI number: 157369858
Start: 1769195
End: 1770502
Strand: Reverse
Name: hisD [H]
Synonym: Spro_1615
Alternate gene names: 157369858
Gene position: 1770502-1769195 (Counterclockwise)
Preceding gene: 157369859
Following gene: 157369857
Centisome position: 32.49
GC content: 60.55
Gene sequence:
>1308_bases ATGTCGAACTTCAATACTCTGGTCAACTGGGCAGACTGCAGCGCCGAACAGCGCACGGCACTGCTGATGCGTCCGGCGAT CTCCGCCTCGGACAGCATCAGCCGCACGGTGAGCGAAATCCTCGACAACGTGAAGGCCAATGGCGATCAGGCGCTGCGCG AATACAGCGCTAAATTTGATAAAACCGAAGTTGGCGCACTGCGCGTCACCGCAGAGCAAATAACGGCTGCCAGCGCGCGT CTGGGCGATGAGATCAAGCAGGCAATGGCAATTGCAGTCGCCAACGTGGAAACCTTCCACAATGCGCAAAAACTGCCGCC GGTTGATGTGGAAACCCAGCCGGGTGTGCGTTGTCAGCAGGTAACCCGTCCGATCGACTCGGTTGGGCTATATATTCCAG GCGGTTCTGCTCCGCTATTTTCTACGGTGTTGATGCTGGCGACACCGGCACGCATCGCCGGTTGCCGCCGCGTAGTGCTG TGTTCACCGCCGCCGATTGCCGATGAGATACTGTATGCCGCACAACTGTGTGGAGTGGAAGAGGTGTTTCAGGTTGGCGG TGCGCAGGCGATCGCCGCTATGGCATTCGGTACCGACTCCGTACCGCGCGTGGCAAAAATCTTCGGGCCGGGCAATGCCT TTGTCACCGAAGCCAAACGCCAGATCAGCCAACGACTGGACGGTGCCGCCATCGATATGCCGGCCGGCCCTTCCGAAGTG CTGGTGATCGCCGACGCCGGTGCCACTCCGGCATTCGTCGCCTCGGATCTGCTGTCACAGGCGGAGCACGGCCCGGACTC GCAGGTGATTTTGTTGACACCGGAAGCCGCGATGGCGCAGGCGGTACGCGATGCCGTAGAACAGCAACTGGCACAATTAC CCCGCGCCGAAACTGCACGTCAGGCGCTGGCCAGTAGCCGACTGATTGTCACCAAAGATTTGGCCGAGTGCGTGGCCATC AGCAATCAGTATGGCCCGGAACACCTGATCATTCAGACCCGCGACGCCCGCGCTCTGGTCGACAGCATCACCAGCGCCGG TTCGGTGTTTCTTGGCGACTGGTCACCGGAGTCTGCCGGTGACTATGCGTCCGGCACCAACCACGTGCTGCCAACCTATG GTTACACCGCCACCTGCTCCAGTTTGGGGCTGGCGGACTTCCAAAAACGCATGACGGTACAAGAGTTGACGCCGCAGGGC TTTATGAACCTGGCCGCCACCATTGAAACCCTGGCCGCCGCCGAGCAGTTGATTGCCCACAAAAACGCCGTGACCCTGCG CGTTGCCGCCCTGAAGGAGCAAGCATGA
Upstream 100 bases:
>100_bases AGTAGCGAAACCCTGTTCTGGGAAACCATGGAAAAACTGAAAGCGCTCGGTGCCAGCTCGATTCTGGTATTGCCTATTGA GAAGATGATGGAGTAACGCC
Downstream 100 bases:
>100_bases GCATTGAAAATCTGGCACGCACCAACGTTCGCGATCTGACCCCTTATCAGTCGGCACGCCGCCTGGGTGGCAACGGCGAC GTGTGGCTGAACGCCAACGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSNFNTLVNWADCSAEQRTALLMRPAISASDSISRTVSEILDNVKANGDQALREYSAKFDKTEVGALRVTAEQITAASAR LGDEIKQAMAIAVANVETFHNAQKLPPVDVETQPGVRCQQVTRPIDSVGLYIPGGSAPLFSTVLMLATPARIAGCRRVVL CSPPPIADEILYAAQLCGVEEVFQVGGAQAIAAMAFGTDSVPRVAKIFGPGNAFVTEAKRQISQRLDGAAIDMPAGPSEV LVIADAGATPAFVASDLLSQAEHGPDSQVILLTPEAAMAQAVRDAVEQQLAQLPRAETARQALASSRLIVTKDLAECVAI SNQYGPEHLIIQTRDARALVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELTPQG FMNLAATIETLAAAEQLIAHKNAVTLRVAALKEQA
Sequences:
>Translated_435_residues MSNFNTLVNWADCSAEQRTALLMRPAISASDSISRTVSEILDNVKANGDQALREYSAKFDKTEVGALRVTAEQITAASAR LGDEIKQAMAIAVANVETFHNAQKLPPVDVETQPGVRCQQVTRPIDSVGLYIPGGSAPLFSTVLMLATPARIAGCRRVVL CSPPPIADEILYAAQLCGVEEVFQVGGAQAIAAMAFGTDSVPRVAKIFGPGNAFVTEAKRQISQRLDGAAIDMPAGPSEV LVIADAGATPAFVASDLLSQAEHGPDSQVILLTPEAAMAQAVRDAVEQQLAQLPRAETARQALASSRLIVTKDLAECVAI SNQYGPEHLIIQTRDARALVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELTPQG FMNLAATIETLAAAEQLIAHKNAVTLRVAALKEQA >Mature_434_residues SNFNTLVNWADCSAEQRTALLMRPAISASDSISRTVSEILDNVKANGDQALREYSAKFDKTEVGALRVTAEQITAASARL GDEIKQAMAIAVANVETFHNAQKLPPVDVETQPGVRCQQVTRPIDSVGLYIPGGSAPLFSTVLMLATPARIAGCRRVVLC SPPPIADEILYAAQLCGVEEVFQVGGAQAIAAMAFGTDSVPRVAKIFGPGNAFVTEAKRQISQRLDGAAIDMPAGPSEVL VIADAGATPAFVASDLLSQAEHGPDSQVILLTPEAAMAQAVRDAVEQQLAQLPRAETARQALASSRLIVTKDLAECVAIS NQYGPEHLIIQTRDARALVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELTPQGF MNLAATIETLAAAEQLIAHKNAVTLRVAALKEQA
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=433, Percent_Identity=84.526558891455, Blast_Score=760, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319819, Length=419, Percent_Identity=46.3007159904535, Blast_Score=368, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45886; Mature: 45754
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFNTLVNWADCSAEQRTALLMRPAISASDSISRTVSEILDNVKANGDQALREYSAKFD CCCCHHHEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC KTEVGALRVTAEQITAASARLGDEIKQAMAIAVANVETFHNAQKLPPVDVETQPGVRCQQ CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH VTRPIDSVGLYIPGGSAPLFSTVLMLATPARIAGCRRVVLCSPPPIADEILYAAQLCGVE HHCCHHHCEEEECCCCCHHHHHHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHCCHH EVFQVGGAQAIAAMAFGTDSVPRVAKIFGPGNAFVTEAKRQISQRLDGAAIDMPAGPSEV HHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCE LVIADAGATPAFVASDLLSQAEHGPDSQVILLTPEAAMAQAVRDAVEQQLAQLPRAETAR EEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHH QALASSRLIVTKDLAECVAISNQYGPEHLIIQTRDARALVDSITSAGSVFLGDWSPESAG HHHHHCCEEEHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCEEEECCCCCCCC DYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELTPQGFMNLAATIETLAAAEQLIAH CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC KNAVTLRVAALKEQA CCCEEEEEEHHCCCC >Mature Secondary Structure SNFNTLVNWADCSAEQRTALLMRPAISASDSISRTVSEILDNVKANGDQALREYSAKFD CCCHHHEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC KTEVGALRVTAEQITAASARLGDEIKQAMAIAVANVETFHNAQKLPPVDVETQPGVRCQQ CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH VTRPIDSVGLYIPGGSAPLFSTVLMLATPARIAGCRRVVLCSPPPIADEILYAAQLCGVE HHCCHHHCEEEECCCCCHHHHHHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHCCHH EVFQVGGAQAIAAMAFGTDSVPRVAKIFGPGNAFVTEAKRQISQRLDGAAIDMPAGPSEV HHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCE LVIADAGATPAFVASDLLSQAEHGPDSQVILLTPEAAMAQAVRDAVEQQLAQLPRAETAR EEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHH QALASSRLIVTKDLAECVAISNQYGPEHLIIQTRDARALVDSITSAGSVFLGDWSPESAG HHHHHCCEEEHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCEEEECCCCCCCC DYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELTPQGFMNLAATIETLAAAEQLIAH CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC KNAVTLRVAALKEQA CCCEEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10222209; 11206551; 11258796 [H]