| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is capM [H]
Identifier: 157369846
GI number: 157369846
Start: 1756838
End: 1757986
Strand: Reverse
Name: capM [H]
Synonym: Spro_1603
Alternate gene names: 157369846
Gene position: 1757986-1756838 (Counterclockwise)
Preceding gene: 157369847
Following gene: 157369823
Centisome position: 32.26
GC content: 43.43
Gene sequence:
>1149_bases ATGAAAATAGTATTGATAGGCACAACAGCAAACTGCGTTATCGGTTTCAGAGCAGATCTGATTAAGTCATTGCATCAGCA AGGGCATATTGTTTACGCATTTGCGCTTGATTATGATGATAAAAGCCGCAAGCAGGTCGCCGCATTGGGTGCCACGCCAG TGAATTATCGTTTCAGTCGTACAGGTCTTAACCCGATAAAGGACCTCTATGATACTTATACACTCAGTAAACAGTTGAAA AGCATTGCGCCAGATCTTGTGTTTTCTTATTTTTCAAAACCATGTATCTTCGGAACGCTAGCTGCGGTCCTTGCAGGCGT CAAGAAACGTTACGCGATGCTCGAAGGTTTGGGCTATGTGTTCACTGAACAACCTCAAGGGGTTAGCTGGAAAGTTAATC TACTGAAGAAAACCCAGACAACACTATACCGTTTAATTTTTCCCAAGCTAGATGCTTTAATTTTATTGAATCCAGACGAT CGCAACGATCTATTAGTTAAGTCAGGCATAAAAGTAAAAAGAGCTCATGTGTTAGGTGGGATAGGCCTTAAACTAACTGA TTATCCCTTTAGCCCTACTCCAACAGAGCCGGTATCATTTATTTTTATCGCTCGCCTTCTGGCGGAAAAAGGGGTACACG AGTATGTTACAGCGGCCAAAGCAGTTAAACAGCGTTATCCTGATATTCAGTTTTATATGCTAGGAGCCGTCGATAAGCAA AACCCTGGCAGCCTGACTGAAAACAGCCTCAAAAAACTGATAGAAGATGACGTTATTATTTACCCTGGTCACGTTTCGAA TGTGCAAGAGTGGATAAAAAAATCCAGTGTTTTCGTTCTACCATCATATTATAGAGAAGGAATCCCCCGCAGCACTCAAG AAGCAATGGCCATGGGCAGAGCGGTGCTTAGCACTGATGTGCCAGGATGCCGCGAAACTGTCATTCACGGGGTCAATGGG TTTTTAATCCAACGCTGGTCCCCCGAAGAATTGACCGCACGTATGATTGAGTTAATAGAAGATCCCGCAAAAATCGTTGA GATGGGACTCGCAAGTTACCAGTTGGCGCAACAAAAATTTGATGCTCATGAAGTCAATGGTCGCTTATTGGAGATGCTCG AGATCCCACAGAATAAGACTCAAGATTAG
Upstream 100 bases:
>100_bases CCAGAATACAGGAAAAATTCTCATTGAATGAAATAGTTACTCAGTGGGAGAACATTTACACAGAGCTGAAAAATAAGAAC AAATAGCTTATAAGGTTTTT
Downstream 100 bases:
>100_bases TGTAGTAAATTTAAAAAAATAGAGAGCGGTCAAAACCGCACTCTATTTTTTTGTATAGTCAATACTCGCACTCACTACCC TTTTTATTCTAGTTATTTCA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKIVLIGTTANCVIGFRADLIKSLHQQGHIVYAFALDYDDKSRKQVAALGATPVNYRFSRTGLNPIKDLYDTYTLSKQLK SIAPDLVFSYFSKPCIFGTLAAVLAGVKKRYAMLEGLGYVFTEQPQGVSWKVNLLKKTQTTLYRLIFPKLDALILLNPDD RNDLLVKSGIKVKRAHVLGGIGLKLTDYPFSPTPTEPVSFIFIARLLAEKGVHEYVTAAKAVKQRYPDIQFYMLGAVDKQ NPGSLTENSLKKLIEDDVIIYPGHVSNVQEWIKKSSVFVLPSYYREGIPRSTQEAMAMGRAVLSTDVPGCRETVIHGVNG FLIQRWSPEELTARMIELIEDPAKIVEMGLASYQLAQQKFDAHEVNGRLLEMLEIPQNKTQD
Sequences:
>Translated_382_residues MKIVLIGTTANCVIGFRADLIKSLHQQGHIVYAFALDYDDKSRKQVAALGATPVNYRFSRTGLNPIKDLYDTYTLSKQLK SIAPDLVFSYFSKPCIFGTLAAVLAGVKKRYAMLEGLGYVFTEQPQGVSWKVNLLKKTQTTLYRLIFPKLDALILLNPDD RNDLLVKSGIKVKRAHVLGGIGLKLTDYPFSPTPTEPVSFIFIARLLAEKGVHEYVTAAKAVKQRYPDIQFYMLGAVDKQ NPGSLTENSLKKLIEDDVIIYPGHVSNVQEWIKKSSVFVLPSYYREGIPRSTQEAMAMGRAVLSTDVPGCRETVIHGVNG FLIQRWSPEELTARMIELIEDPAKIVEMGLASYQLAQQKFDAHEVNGRLLEMLEIPQNKTQD >Mature_382_residues MKIVLIGTTANCVIGFRADLIKSLHQQGHIVYAFALDYDDKSRKQVAALGATPVNYRFSRTGLNPIKDLYDTYTLSKQLK SIAPDLVFSYFSKPCIFGTLAAVLAGVKKRYAMLEGLGYVFTEQPQGVSWKVNLLKKTQTTLYRLIFPKLDALILLNPDD RNDLLVKSGIKVKRAHVLGGIGLKLTDYPFSPTPTEPVSFIFIARLLAEKGVHEYVTAAKAVKQRYPDIQFYMLGAVDKQ NPGSLTENSLKKLIEDDVIIYPGHVSNVQEWIKKSSVFVLPSYYREGIPRSTQEAMAMGRAVLSTDVPGCRETVIHGVNG FLIQRWSPEELTARMIELIEDPAKIVEMGLASYQLAQQKFDAHEVNGRLLEMLEIPQNKTQD
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 42773; Mature: 42773
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVLIGTTANCVIGFRADLIKSLHQQGHIVYAFALDYDDKSRKQVAALGATPVNYRFSR CEEEEEECCCCEEEHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEECC TGLNPIKDLYDTYTLSKQLKSIAPDLVFSYFSKPCIFGTLAAVLAGVKKRYAMLEGLGYV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCE FTEQPQGVSWKVNLLKKTQTTLYRLIFPKLDALILLNPDDRNDLLVKSGIKVKRAHVLGG EECCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCEEEEHHEEEC IGLKLTDYPFSPTPTEPVSFIFIARLLAEKGVHEYVTAAKAVKQRYPDIQFYMLGAVDKQ CCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC NPGSLTENSLKKLIEDDVIIYPGHVSNVQEWIKKSSVFVLPSYYREGIPRSTQEAMAMGR CCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHCCEEEEEHHHHCCCCCCHHHHHHHHH AVLSTDVPGCRETVIHGVNGFLIQRWSPEELTARMIELIEDPAKIVEMGLASYQLAQQKF HHHHCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC DAHEVNGRLLEMLEIPQNKTQD CHHHHCHHHHHHHHCCCCCCCC >Mature Secondary Structure MKIVLIGTTANCVIGFRADLIKSLHQQGHIVYAFALDYDDKSRKQVAALGATPVNYRFSR CEEEEEECCCCEEEHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEECC TGLNPIKDLYDTYTLSKQLKSIAPDLVFSYFSKPCIFGTLAAVLAGVKKRYAMLEGLGYV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCE FTEQPQGVSWKVNLLKKTQTTLYRLIFPKLDALILLNPDDRNDLLVKSGIKVKRAHVLGG EECCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCEEEEHHEEEC IGLKLTDYPFSPTPTEPVSFIFIARLLAEKGVHEYVTAAKAVKQRYPDIQFYMLGAVDKQ CCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC NPGSLTENSLKKLIEDDVIIYPGHVSNVQEWIKKSSVFVLPSYYREGIPRSTQEAMAMGR CCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHCCEEEEEHHHHCCCCCCHHHHHHHHH AVLSTDVPGCRETVIHGVNGFLIQRWSPEELTARMIELIEDPAKIVEMGLASYQLAQQKF HHHHCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC DAHEVNGRLLEMLEIPQNKTQD CHHHHCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]