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The map label for this gene is yohK [H]

Identifier: 157369812

GI number: 157369812

Start: 1710959

End: 1711654

Strand: Reverse

Name: yohK [H]

Synonym: Spro_1569

Alternate gene names: 157369812

Gene position: 1711654-1710959 (Counterclockwise)

Preceding gene: 157369813

Following gene: 157369811

Centisome position: 31.41

GC content: 55.32

Gene sequence:

>696_bases
ATGATCCATGAAATCTGGTGGTCATTGCCGTTAACGCTGGCAGTCTACTTTGCCGCACGCAAGCTGGCGCAGTGGCTGAA
CATGCCGCTGCTGAACCCGCTGCTGGTATCAATGGCGGTGATCATTCCCCTGCTGTTACTGACCGGCATCCCTTATGAAC
GCTATTTTCAGGGCAGCAAAATCCTCAATGACTTATTGCAGCCCGCCGTCGTCGCGCTTGCCTACCCGCTGTATGAACAG
CTGCACCAGATCCGCGCCCGTTGGAAATCCATTATCGCCGTCTGCTTTATCGGCAGTATGACGGCCATGATCAGCGGCGG
TGCCATCGCTTTATTGATGGGGGCGACTCCGGAAATTGCCGCTTCCATCATGCCTAAATCGGTTACGACCCCTATCGCCA
TGGCAGTGGCGGAATCGCTCGGCGGCATCCCGGCAATCAGCGCCGTCTGCGTAATCTTCGTCGGTATTCTCGGCGCAGTA
TTCGGGCATACATTATTTAAACTATTGAAAATCACCACTCGCTCGGCGAGGGGTTTGGCCATGGGTACCGCATCTCATGC
ACTGGGCACGGCTCGTTGCGCGGAAATGGACTATCAGGAAGGTGCATTCGGCTCTTTGGCGTTGGTGATCTGCGGGATCA
TTACCTCGCTGCTGGCCCCTTTCCTGTTCCCGGTACTGCTGCATATGTTCAGTTAA

Upstream 100 bases:

>100_bases
TCAGCACCCTGATGGTGCTGGTGGTGGTGGGCTACACCTCGCATTATTTCCACCGGGAACGTCGCATCGTCGGCAAACCG
GATGCCGCGGAAGGTGAAAA

Downstream 100 bases:

>100_bases
AACGGTTAAAACTTGCGATACATCTCGCAATTATGCTTTTCATTGCATTGATTTCATCAATAAAGAGATTTACATCACAC
TTTATTCACGCAAGGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIHEIWWSLPLTLAVYFAARKLAQWLNMPLLNPLLVSMAVIIPLLLLTGIPYERYFQGSKILNDLLQPAVVALAYPLYEQ
LHQIRARWKSIIAVCFIGSMTAMISGGAIALLMGATPEIAASIMPKSVTTPIAMAVAESLGGIPAISAVCVIFVGILGAV
FGHTLFKLLKITTRSARGLAMGTASHALGTARCAEMDYQEGAFGSLALVICGIITSLLAPFLFPVLLHMFS

Sequences:

>Translated_231_residues
MIHEIWWSLPLTLAVYFAARKLAQWLNMPLLNPLLVSMAVIIPLLLLTGIPYERYFQGSKILNDLLQPAVVALAYPLYEQ
LHQIRARWKSIIAVCFIGSMTAMISGGAIALLMGATPEIAASIMPKSVTTPIAMAVAESLGGIPAISAVCVIFVGILGAV
FGHTLFKLLKITTRSARGLAMGTASHALGTARCAEMDYQEGAFGSLALVICGIITSLLAPFLFPVLLHMFS
>Mature_231_residues
MIHEIWWSLPLTLAVYFAARKLAQWLNMPLLNPLLVSMAVIIPLLLLTGIPYERYFQGSKILNDLLQPAVVALAYPLYEQ
LHQIRARWKSIIAVCFIGSMTAMISGGAIALLMGATPEIAASIMPKSVTTPIAMAVAESLGGIPAISAVCVIFVGILGAV
FGHTLFKLLKITTRSARGLAMGTASHALGTARCAEMDYQEGAFGSLALVICGIITSLLAPFLFPVLLHMFS

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=227, Percent_Identity=78.8546255506608, Blast_Score=371, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24769; Mature: 24769

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHEIWWSLPLTLAVYFAARKLAQWLNMPLLNPLLVSMAVIIPLLLLTGIPYERYFQGSK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILNDLLQPAVVALAYPLYEQLHQIRARWKSIIAVCFIGSMTAMISGGAIALLMGATPEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHH
ASIMPKSVTTPIAMAVAESLGGIPAISAVCVIFVGILGAVFGHTLFKLLKITTRSARGLA
HHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
MGTASHALGTARCAEMDYQEGAFGSLALVICGIITSLLAPFLFPVLLHMFS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIHEIWWSLPLTLAVYFAARKLAQWLNMPLLNPLLVSMAVIIPLLLLTGIPYERYFQGSK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILNDLLQPAVVALAYPLYEQLHQIRARWKSIIAVCFIGSMTAMISGGAIALLMGATPEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHH
ASIMPKSVTTPIAMAVAESLGGIPAISAVCVIFVGILGAVFGHTLFKLLKITTRSARGLA
HHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
MGTASHALGTARCAEMDYQEGAFGSLALVICGIITSLLAPFLFPVLLHMFS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]