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The map label for this gene is yhcH [H]

Identifier: 157369725

GI number: 157369725

Start: 1617264

End: 1617773

Strand: Reverse

Name: yhcH [H]

Synonym: Spro_1482

Alternate gene names: 157369725

Gene position: 1617773-1617264 (Counterclockwise)

Preceding gene: 157369726

Following gene: 157369724

Centisome position: 29.69

GC content: 50.59

Gene sequence:

>510_bases
ATGGAAACGAACCCGACAGGGTTCAACACATGGAGAATTAAAGTGATTTATAACACTCTGTTTAACCCACGCTATGGCCG
TGGGCTGTCACCGATACTGAATGAAACCCTCACCGCCCTTCGTCAATACGATCTGCCTGAGCTGGCACTGGGCCGGCATG
AGATTGACGGTGAAAAAATTTTCATGGAAGTGATGACGCTAACCACCGGGTTGGCAGAAACGCGACGTGCAGTGCTGCAT
CAGGAATATGCCGAAATACATCTGTTAATCAGCGGTGAGGAACGTATTGATTACGGCATGCTGGGGGACTGGCAAAGCGA
ATTGCCCTATGACGAAGCTCAGGATCTGCAACTGTTGGACATCATCCGTCATCGCCAGACGCTGACGATGTTTCCGGGCA
TGTACGCCATCTTTTTCCCTCATGAACCGCATCAGGTCGGATGCCAGTTGAATACGCCGATGCCGATCAAAAAAGCGGTG
GTCAAGATGCATTACACCCTGTTGCTGTGA

Upstream 100 bases:

>100_bases
TCGGCTACGCCTGCATTTGCCAAAAGCGGAATGCAGGCGGGTTAACTGTTTTCACAATGGCAAACAGGCATACTTTTCCG
CGCAATATCCCCACGTTTTT

Downstream 100 bases:

>100_bases
CCGGTGAGCCGGTCGATTCGGCCGGCTCTCTCGTCACTCTATTGAGAGCAGCAACACTGGAGCTTAAATTTAAAAACAGA
TTCATCCGAATAAAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
METNPTGFNTWRIKVIYNTLFNPRYGRGLSPILNETLTALRQYDLPELALGRHEIDGEKIFMEVMTLTTGLAETRRAVLH
QEYAEIHLLISGEERIDYGMLGDWQSELPYDEAQDLQLLDIIRHRQTLTMFPGMYAIFFPHEPHQVGCQLNTPMPIKKAV
VKMHYTLLL

Sequences:

>Translated_169_residues
METNPTGFNTWRIKVIYNTLFNPRYGRGLSPILNETLTALRQYDLPELALGRHEIDGEKIFMEVMTLTTGLAETRRAVLH
QEYAEIHLLISGEERIDYGMLGDWQSELPYDEAQDLQLLDIIRHRQTLTMFPGMYAIFFPHEPHQVGCQLNTPMPIKKAV
VKMHYTLLL
>Mature_169_residues
METNPTGFNTWRIKVIYNTLFNPRYGRGLSPILNETLTALRQYDLPELALGRHEIDGEKIFMEVMTLTTGLAETRRAVLH
QEYAEIHLLISGEERIDYGMLGDWQSELPYDEAQDLQLLDIIRHRQTLTMFPGMYAIFFPHEPHQVGCQLNTPMPIKKAV
VKMHYTLLL

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0227 [H]

Homologues:

Organism=Escherichia coli, GI1789615, Length=126, Percent_Identity=40.4761904761905, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1790001, Length=155, Percent_Identity=32.9032258064516, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI87082398, Length=131, Percent_Identity=25.1908396946565, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 19617; Mature: 19617

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNPTGFNTWRIKVIYNTLFNPRYGRGLSPILNETLTALRQYDLPELALGRHEIDGEKI
CCCCCCCCCEEEEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH
FMEVMTLTTGLAETRRAVLHQEYAEIHLLISGEERIDYGMLGDWQSELPYDEAQDLQLLD
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHH
IIRHRQTLTMFPGMYAIFFPHEPHQVGCQLNTPMPIKKAVVKMHYTLLL
HHHHHHHEEECCCEEEEECCCCCHHCCEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
METNPTGFNTWRIKVIYNTLFNPRYGRGLSPILNETLTALRQYDLPELALGRHEIDGEKI
CCCCCCCCCEEEEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH
FMEVMTLTTGLAETRRAVLHQEYAEIHLLISGEERIDYGMLGDWQSELPYDEAQDLQLLD
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHH
IIRHRQTLTMFPGMYAIFFPHEPHQVGCQLNTPMPIKKAVVKMHYTLLL
HHHHHHHEEECCCEEEEECCCCCHHCCEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]