| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is lon [H]
Identifier: 157369340
GI number: 157369340
Start: 1206828
End: 1209182
Strand: Direct
Name: lon [H]
Synonym: Spro_1097
Alternate gene names: 157369340
Gene position: 1206828-1209182 (Clockwise)
Preceding gene: 157369339
Following gene: 157369341
Centisome position: 22.15
GC content: 54.65
Gene sequence:
>2355_bases ATGAACCCTGAGCGTTCCGAACGCATTGAAATCCCCGTGTTGCCGTTGCGCGACGTGGTGGTTTATCCGCACATGGTGAT CCCGTTATTTGTTGGCCGGGAAAAATCGATTCGGTGCCTCGAAGCAGCAATGGATCACGATAAAAAGATCATGCTGGTGG CACAGAAAGAGGCCTCAACGGATGAACCTGGCATTAATGATTTGTTCTCAGTCGGCACGGTAGCGTCGATCCTGCAAATG CTGAAATTGCCTGATGGCACGGTAAAAGTGCTGGTCGAAGGCCTGCAGCGGGCGCGTATTACTACGCTTTCCGACAGCGG CGAGCATTTTGCTGCCCAGGCAGAATATCTTGAGTCACCCGCGATTGACGAGCGTGAACAAGAAGTGCTGGTACGCACTG CAATCAATCAGTTTGAAGGCTACATCAAACTGAACAAGAAAATTCCACCGGAGGTGCTGACGTCATTGAACAGCATCGAC GATGCTGCGCGCCTGGCGGATACCATCGCCGCGCACATGCCGCTGAAGCTCAGCGACAAGCAGTCGGTACTGGAGATGTT CGATATCACCGAACGTCTTGAATATCTGATGGCGATGATGGAATCGGAAATCGACCTGCTGCAGGTTGAGAAACGCATCC GCAATCGCGTCAAAAAACAGATGGAAAAAAGTCAGCGCGAGTACTATCTGAATGAGCAGATGAAGGCGATTCAGAAAGAA CTGGGCGAGATGGACGATGCGCCGGACGAGCATGAAGCGCTGAAGCGCAAGATCGAAGCGGCGAAAATGCCGAAAGACGC GCGTGAAAAAACCGAAGCGGAACTGCAAAAGCTGAAAATGATGTCGCCAATGTCAGCGGAAGCAACCGTAGTGCGCGGCT ACATCGATTGGATGTTGCAGGTGCCGTGGAATGCACGCAGCAAGGTTAAAAAAGACCTGCTCAAGGCGCAGGAAGTGCTC GATATCGATCACTACGGCCTGGAGCGAGTCAAAGACCGTATTCTTGAGTATCTCGCAGTACAGAGCCGCGTAAGCAAAAT CAAAGGGCCGATCCTGTGTCTGGTAGGGCCTCCTGGCGTCGGTAAAACCTCGTTGGGCCAGTCGATCGCTAAAGCGACCG GCCGCCAGTATGTGCGTATGGCGTTGGGTGGCGTGCGTGACGAAGCGGAAATCCGTGGTCACCGCCGTACCTATATCGGT TCAATGCCGGGCAAACTGATCCAGAAAATGGCCAAGGTCGGGGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAA GATGTCTTCCGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGTTGGATCCGGAACAGAACGTGGCGTTTAACG ATCACTATCTGGAAGTGGATTACGATCTGTCCGATGTGATGTTCGTGGCGACCTCGAACTCGATGAACATTCCTGCGCCG TTGCTGGATCGTATGGAAGTGATCCGTCTGTCTGGCTATACCGAGGACGAGAAGCTCAATATTGCCAAGCAGCACCTGTT GCCGAAGCAGCTTGAGCGTAACGCCCTGAAAAAAGGTGAACTGACGGTCGACGACAGCGCCATTACCGGTATTATCCGCT TCTACACTCGTGAAGCCGGGGTGCGTAGCCTGGAGCGCGAAATCTCCAAGCTGTGCCGTAAGGCGGTGAAAACGCTGCTG ATGGACAAGAAGCTCAAGCATATCGAGATCAACGGCGACAACCTGAAGGATTACCTGGGCGTACAGCGTGTCGACTACGG CCGTGCGGATACCGAAAACCGCGTGGGTGAAGTTACCGGCCTGGCGTGGACGGAAGTGGGTGGCGATCTGCTGACCATTG AAACCGCCTGCGTACCGGGCAAAGGTAAGCTGACCTACACCGGTTCGCTCGGTGAAGTGATGCAGGAATCTATCCAGGCT GCACTGACCGTGGTGCGTGCGCGCGCGGATAAATTGGGGATTAATCCTGATTTTTACGAGAAGCGTGACATCCACGTGCA CGTGCCGGAAGGCGCTACACCTAAGGATGGCCCAAGCGCCGGTATTGCGATGTGCACCGCGCTGGTTTCCTGCCTGACGG GCAACCCGGTTCGTGCCGATGTGGCGATGACCGGTGAGATCACGTTGCGTGGTCAGGTTCTGCCGATTGGTGGCCTGAAA GAGAAACTGCTGGCGGCGCATCGCGGCGGTATCAAAACCGTGCTGATCCCGTATGAAAACAAGCGCGATCTGGAAGAGAT CCCGGCCAATGTTATTGCCGATCTGGTTATTCATCCGGTGCAGCGAATTGATGAGGTTTTGGACCTTGCGTTGCTCAATC CGGCCTTCGGTGCACTGCCGGTAGCGGCAAAATAG
Upstream 100 bases:
>100_bases CCCCATATACTCATTAACCAGATTTTATGAAACGTTTGATGCTTGCGTCTCATGAGATTCCCCCTCAACCTGGCGGAAGT TAAACTTAAGAGAGAGCTCT
Downstream 100 bases:
>100_bases TGATGTATCGCAAAAACCATTGATAAAACTTATGCTGGCAAGTCATTTCGGACTTGCCAGTCTTTTTTTGTACCGCTAAG TTAGACAGCTGTCGGCCCGC
Product: DNA-binding ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGINDLFSVGTVASILQM LKLPDGTVKVLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQEVLVRTAINQFEGYIKLNKKIPPEVLTSLNSID DAARLADTIAAHMPLKLSDKQSVLEMFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNARSKVKKDLLKAQEVL DIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIG SMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRFYTREAGVRSLEREISKLCRKAVKTLL MDKKLKHIEINGDNLKDYLGVQRVDYGRADTENRVGEVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQA ALTVVRARADKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK EKLLAAHRGGIKTVLIPYENKRDLEEIPANVIADLVIHPVQRIDEVLDLALLNPAFGALPVAAK
Sequences:
>Translated_784_residues MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGINDLFSVGTVASILQM LKLPDGTVKVLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQEVLVRTAINQFEGYIKLNKKIPPEVLTSLNSID DAARLADTIAAHMPLKLSDKQSVLEMFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNARSKVKKDLLKAQEVL DIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIG SMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRFYTREAGVRSLEREISKLCRKAVKTLL MDKKLKHIEINGDNLKDYLGVQRVDYGRADTENRVGEVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQA ALTVVRARADKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK EKLLAAHRGGIKTVLIPYENKRDLEEIPANVIADLVIHPVQRIDEVLDLALLNPAFGALPVAAK >Mature_784_residues MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGINDLFSVGTVASILQM LKLPDGTVKVLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQEVLVRTAINQFEGYIKLNKKIPPEVLTSLNSID DAARLADTIAAHMPLKLSDKQSVLEMFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNARSKVKKDLLKAQEVL DIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIG SMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRFYTREAGVRSLEREISKLCRKAVKTLL MDKKLKHIEINGDNLKDYLGVQRVDYGRADTENRVGEVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQA ALTVVRARADKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK EKLLAAHRGGIKTVLIPYENKRDLEEIPANVIADLVIHPVQRIDEVLDLALLNPAFGALPVAAK
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=634, Percent_Identity=41.7981072555205, Blast_Score=507, Evalue=1e-143, Organism=Homo sapiens, GI31377667, Length=777, Percent_Identity=38.2239382239382, Blast_Score=506, Evalue=1e-143, Organism=Escherichia coli, GI1786643, Length=784, Percent_Identity=93.1122448979592, Blast_Score=1476, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=659, Percent_Identity=40.0606980273141, Blast_Score=484, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17556486, Length=786, Percent_Identity=32.5699745547074, Blast_Score=406, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6319449, Length=661, Percent_Identity=40.695915279879, Blast_Score=481, Evalue=1e-136, Organism=Drosophila melanogaster, GI24666867, Length=628, Percent_Identity=44.5859872611465, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI221513036, Length=626, Percent_Identity=44.7284345047923, Blast_Score=528, Evalue=1e-150,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 87298; Mature: 87298
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEAST CCCCCCCEEECCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCC DEPGINDLFSVGTVASILQMLKLPDGTVKVLVEGLQRARITTLSDSGEHFAAQAEYLESP CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCC AIDEREQEVLVRTAINQFEGYIKLNKKIPPEVLTSLNSIDDAARLADTIAAHMPLKLSDK CCCCHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCH QSVLEMFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEMDDAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQ HCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC VPWNARSKVKKDLLKAQEVLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGV CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC GKTSLGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLF CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCHH LLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSNSMNIPAP HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCCEEEEECCCCCEEEEEECCCCCCCHH LLDRMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRFYTREAG HHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHH VRSLEREISKLCRKAVKTLLMDKKLKHIEINGDNLKDYLGVQRVDYGRADTENRVGEVTG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHCCCCCCCCCCHHHHHCC LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGINPDFYE EEHHHCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECEEEEEEEEEECCCHH EKLLAAHRGGIKTVLIPYENKRDLEEIPANVIADLVIHPVQRIDEVLDLALLNPAFGALP HHHHHHHCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VAAK CCCC >Mature Secondary Structure MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEAST CCCCCCCEEECCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCC DEPGINDLFSVGTVASILQMLKLPDGTVKVLVEGLQRARITTLSDSGEHFAAQAEYLESP CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCC AIDEREQEVLVRTAINQFEGYIKLNKKIPPEVLTSLNSIDDAARLADTIAAHMPLKLSDK CCCCHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCH QSVLEMFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEMDDAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQ HCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC VPWNARSKVKKDLLKAQEVLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGV CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC GKTSLGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLF CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCHH LLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSNSMNIPAP HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCCEEEEECCCCCEEEEEECCCCCCCHH LLDRMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRFYTREAG HHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHH VRSLEREISKLCRKAVKTLLMDKKLKHIEINGDNLKDYLGVQRVDYGRADTENRVGEVTG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHCCCCCCCCCCHHHHHCC LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGINPDFYE EEHHHCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECEEEEEEEEEECCCHH EKLLAAHRGGIKTVLIPYENKRDLEEIPANVIADLVIHPVQRIDEVLDLALLNPAFGALP HHHHHHHCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VAAK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA