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The map label for this gene is rbsC [H]

Identifier: 157369273

GI number: 157369273

Start: 1132634

End: 1133659

Strand: Direct

Name: rbsC [H]

Synonym: Spro_1030

Alternate gene names: 157369273

Gene position: 1132634-1133659 (Clockwise)

Preceding gene: 157369272

Following gene: 157369274

Centisome position: 20.79

GC content: 57.7

Gene sequence:

>1026_bases
ATGAATAATTCTATCCCTACGCTCAAGGAGCCTGTCATGACTTCGAACCCGCTGCCACCCGCCGCAAAAAATCCCACGCT
GAAACGGGCATTGTTGGGCGATATGATGCAAACCGTCGGCATTTTGCCGATATTGATCCTGATCGTCGCCGTTTTCGGCT
TTGTCGCACCGAATTTCTTTACCGACGCCAACCTGCTGAATATTGCCCGGCAGGCGTCGATTAACATCGTGCTGGCGGCG
GGTATGACCTTCATCATCCTGACCGGCGGTATCGATCTTTCTGTTGGCTCGATGCTGGGCACCACGGCGGTGGTGGCGAT
GGCGGTCTCACTGATGCCGGGGCTGGCCGGGCTGTCTATCCCACTGGCGCTGCTGGCCGGTTTGGGCATGGGATTGTTTA
ACGGTTTTCTGGTGGCCTACGCCGGTTTACTACCCTTTATTGTCACGCTAGGGACCTATACCGCACTGCGCGGCGCGGCT
TATCTGCTGGCCGACGGCACCACCATCATCAATTCCGATATCAGTTTCGAATGGATCGGCAACTCGTATCTGGGGCCGAT
CCCCTGGCTGGTGATTATTGCCTTTGCCGTAATTGCGCTGTGCTGGTTCATTCTGCGCCGCACCACGCTGGGGGTACATA
TCTACGCGGTGGGCGGCAACATGCAGGCGGCACGCCTGACCGGGATTAAGGTCGGTGCGGTGCTGCTGTTCGTCTACGGC
ATGAGCGGTTTGCTGTCAGGGCTGGGGGGAATAATGAGTGCCTCACGGCTGTACAGCGCCAACGGCAACCTCGGCATGGG
CTATGAGCTGGATGCGATTGCCGCGGTGATCCTCGGCGGCACCAGCTTTGTCGGCGGCATTGGCACCATTACCGGCACGC
TGGTGGGGGCGCTGATTATCGCCACCCTGAACAACGGCATGACGCTGATGGGCGTCTCATACTTCTGGCAATTGGTGATC
AAGGGGGCGGTGATCATCATAGCTGTGCTAATCGACAAATATCGCACCCGCAACTACCAACACTAA

Upstream 100 bases:

>100_bases
GAAGGCAGTATTGCCGGGGAATTGAGCGGCACCGAGATCAGCCAGGAGAGCATCATGACGCTGGCCACCGGCGTCGAACC
CGCCCTGGAGGCGGCCAGCC

Downstream 100 bases:

>100_bases
CTTACCCGGTGTCTTTCAAGCTGCGGGGTGAGTGATAAAGAAAGGTCGGCGCCCACCGGGGCAGGTTTTCGTAGATCGGA
AAATAATGAGGAAAACACTA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNNSIPTLKEPVMTSNPLPPAAKNPTLKRALLGDMMQTVGILPILILIVAVFGFVAPNFFTDANLLNIARQASINIVLAA
GMTFIILTGGIDLSVGSMLGTTAVVAMAVSLMPGLAGLSIPLALLAGLGMGLFNGFLVAYAGLLPFIVTLGTYTALRGAA
YLLADGTTIINSDISFEWIGNSYLGPIPWLVIIAFAVIALCWFILRRTTLGVHIYAVGGNMQAARLTGIKVGAVLLFVYG
MSGLLSGLGGIMSASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVI
KGAVIIIAVLIDKYRTRNYQH

Sequences:

>Translated_341_residues
MNNSIPTLKEPVMTSNPLPPAAKNPTLKRALLGDMMQTVGILPILILIVAVFGFVAPNFFTDANLLNIARQASINIVLAA
GMTFIILTGGIDLSVGSMLGTTAVVAMAVSLMPGLAGLSIPLALLAGLGMGLFNGFLVAYAGLLPFIVTLGTYTALRGAA
YLLADGTTIINSDISFEWIGNSYLGPIPWLVIIAFAVIALCWFILRRTTLGVHIYAVGGNMQAARLTGIKVGAVLLFVYG
MSGLLSGLGGIMSASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVI
KGAVIIIAVLIDKYRTRNYQH
>Mature_341_residues
MNNSIPTLKEPVMTSNPLPPAAKNPTLKRALLGDMMQTVGILPILILIVAVFGFVAPNFFTDANLLNIARQASINIVLAA
GMTFIILTGGIDLSVGSMLGTTAVVAMAVSLMPGLAGLSIPLALLAGLGMGLFNGFLVAYAGLLPFIVTLGTYTALRGAA
YLLADGTTIINSDISFEWIGNSYLGPIPWLVIIAFAVIALCWFILRRTTLGVHIYAVGGNMQAARLTGIKVGAVLLFVYG
MSGLLSGLGGIMSASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVI
KGAVIIIAVLIDKYRTRNYQH

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4158

COG function: function code R; Predicted ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=309, Percent_Identity=44.0129449838188, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1790524, Length=333, Percent_Identity=38.4384384384384, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1788896, Length=345, Percent_Identity=33.6231884057971, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI145693152, Length=305, Percent_Identity=35.7377049180328, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788471, Length=332, Percent_Identity=36.7469879518072, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789992, Length=345, Percent_Identity=33.9130434782609, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI145693214, Length=269, Percent_Identity=37.9182156133829, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082395, Length=315, Percent_Identity=33.6507936507937, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1787793, Length=293, Percent_Identity=33.4470989761092, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787794, Length=308, Percent_Identity=29.8701298701299, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35545; Mature: 35545

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSIPTLKEPVMTSNPLPPAAKNPTLKRALLGDMMQTVGILPILILIVAVFGFVAPNFF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TDANLLNIARQASINIVLAAGMTFIILTGGIDLSVGSMLGTTAVVAMAVSLMPGLAGLSI
CCHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH
PLALLAGLGMGLFNGFLVAYAGLLPFIVTLGTYTALRGAAYLLADGTTIINSDISFEWIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEECCCEEEECC
NSYLGPIPWLVIIAFAVIALCWFILRRTTLGVHIYAVGGNMQAARLTGIKVGAVLLFVYG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHCCHHHHHHHHHHHHH
MSGLLSGLGGIMSASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALII
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHH
ATLNNGMTLMGVSYFWQLVIKGAVIIIAVLIDKYRTRNYQH
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNSIPTLKEPVMTSNPLPPAAKNPTLKRALLGDMMQTVGILPILILIVAVFGFVAPNFF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TDANLLNIARQASINIVLAAGMTFIILTGGIDLSVGSMLGTTAVVAMAVSLMPGLAGLSI
CCHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH
PLALLAGLGMGLFNGFLVAYAGLLPFIVTLGTYTALRGAAYLLADGTTIINSDISFEWIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEECCCEEEECC
NSYLGPIPWLVIIAFAVIALCWFILRRTTLGVHIYAVGGNMQAARLTGIKVGAVLLFVYG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHCCHHHHHHHHHHHHH
MSGLLSGLGGIMSASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALII
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHH
ATLNNGMTLMGVSYFWQLVIKGAVIIIAVLIDKYRTRNYQH
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]