| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hutU [H]
Identifier: 157369050
GI number: 157369050
Start: 899932
End: 901713
Strand: Reverse
Name: hutU [H]
Synonym: Spro_0805
Alternate gene names: 157369050
Gene position: 901713-899932 (Counterclockwise)
Preceding gene: 157369051
Following gene: 157369049
Centisome position: 16.55
GC content: 59.15
Gene sequence:
>1782_bases ATGTTAATAAACCCTACGCATTGTTATGGCGTGGTGATTCACCCCACCGCGTTATGGGATTCTGCACCAATACTGTTTGA GGAAAATGCTGTGACTGCAAATAACAAAGTTCGCAATGTCGAAGTACGCGCGCCACGCGGCACAAAATTAAATGCAAAAA GCTGGCTGACCGAAGCGCCGTTGCGCATGCTGATGAACAACCTCGATCCTGAAGTGGCGGAGAACCCGCACGAGCTGGTG GTATACGGCGGTATTGGCCGCGCCGCGCGTGACTGGGATTGCTACGACAAAATTGTCGCTACCCTGAAAACCCTGGAAGA CGACGAAACCCTGCTGGTGCAGTCCGGCAAACCGGTTGGGGTATTCAAAACCCACAGCAACGCGCCACGCGTGCTGATCG CCAACTCCAACCTGGTGCCTCACTGGGCAACCTGGGAACACTTTAACGAACTGGATGCCAAAGGCCTGGCCATGTACGGC CAGATGACCGCCGGCAGCTGGATCTACATCGGCAGCCAGGGCATCGTCCAGGGCACCTACGAGACCTTCGTCGAAGCGGG TCGCCAGCATTATGACGGCAGCCTGCAAGGCCGCTGGGTACTGACCGCCGGTCTGGGTGGCATGGGTGGCGCACAGCCGC TGGCCGCCACGCTGGCAGGTGCTTGCTCGCTGAACATCGAATGCCAGCAGAGCCGCATCGATTTCCGCCTGAAAACCCGC TATGTCGATGAACAGGCCAAAGATCTGGACGACGCACTGGCCCGCATCAAGAAATACACCGCTGAAGGCAAAGCCATCTC CATCGCCCTGTGCGGTAACGCGGCGGACGTTTTGCCGGAACTGGTGCGCCGCGGCGTGCGTCCAGACATGGTCACCGACC AGACCAGCGCCCACGATCCGCTGAACGGCTACCTGCCTAAGGGCTGGAGCTGGGAAGAATACCGTCAGCGTGCGCTGACC GAACCCGCTCAGGTGGTTATCGCCGCCAAGCAGTCAATGGCTGAACACGTTGAAGCCATGCTGGCGTTCCAGAAAATGGG CGTGCCAACCTTCGACTACGGCAACAACATTCGTCAGATGGCGAAAGAAATGGGCGTCAGCAATGCCTTTGATTTCCCAG GCTTCGTACCGGCTTATATCCGTCCGCTGTTCTGCCGCGGCGTTGGCCCGTTCCGCTGGGCCGCACTGTCTGGCGATCCA CAAGACATCTACAAAACCGACGCCATGGTTAAAGAATTGATCCCGGATGACGAGCATCTGCACCGCTGGCTGGATATGGC ACGCGAGCGCATCAGCTTCCAGGGTCTGCCGGCACGTATCTGCTGGGTCGGTCTGGGCCAACGCGCCAAACTGGGTCTGG CGTTCAACGAAATGGTCCGCAGCGGTGAGCTGTCTGCACCTATCGTCATCGGCCGTGACCATCTGGACTCCGGCTCGGTT GCCAGCCCGAACCGTGAAACCGAATCAATGAAAGACGGCTCAGACGCCGTATCCGACTGGCCGTTGCTCAATGCCCTGCT CAATACCGCCAGCGGCGCGACCTGGGTTTCCCTGCACCACGGCGGTGGCGTCGGCATGGGCTTCTCCCAACACTCCGGTA TGGTTATCGTTTGTGACGGCACCGATGAAGCCGCAGAACGCATCGCCCGCGTATTACATAATGACCCGGCCACCGGCGTA ATGCGTCACGCCGATGCCGGTTACGACATCGCCATTGAATGCGCCCGCGAGCAAGGTCTGAACCTGCCGATGGTGGCTGC GACTCAAGGAGACAAAGCATGA
Upstream 100 bases:
>100_bases ATTAAATAACATCATATTGATTAATAACAAAAATAACTTTCTCTTATGCCATTTTGGGCATCCACTGGTCGGTGTTGCAT ATGCTTGTACATACAAGTAT
Downstream 100 bases:
>100_bases AAGCGCTGACTATTCGCCCAGGCCAACTGACACTGGCGCAACTGCGTGAAATTTATCAACACCCGGTCACCCTGACTCTG GACGACAACGCCTACGCAGA
Product: urocanate hydratase
Products: NA
Alternate protein names: Urocanase; Imidazolonepropionate hydrolase [H]
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MLINPTHCYGVVIHPTALWDSAPILFEENAVTANNKVRNVEVRAPRGTKLNAKSWLTEAPLRMLMNNLDPEVAENPHELV VYGGIGRAARDWDCYDKIVATLKTLEDDETLLVQSGKPVGVFKTHSNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYG QMTAGSWIYIGSQGIVQGTYETFVEAGRQHYDGSLQGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLKTR YVDEQAKDLDDALARIKKYTAEGKAISIALCGNAADVLPELVRRGVRPDMVTDQTSAHDPLNGYLPKGWSWEEYRQRALT EPAQVVIAAKQSMAEHVEAMLAFQKMGVPTFDYGNNIRQMAKEMGVSNAFDFPGFVPAYIRPLFCRGVGPFRWAALSGDP QDIYKTDAMVKELIPDDEHLHRWLDMARERISFQGLPARICWVGLGQRAKLGLAFNEMVRSGELSAPIVIGRDHLDSGSV ASPNRETESMKDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAERIARVLHNDPATGV MRHADAGYDIAIECAREQGLNLPMVAATQGDKA
Sequences:
>Translated_593_residues MLINPTHCYGVVIHPTALWDSAPILFEENAVTANNKVRNVEVRAPRGTKLNAKSWLTEAPLRMLMNNLDPEVAENPHELV VYGGIGRAARDWDCYDKIVATLKTLEDDETLLVQSGKPVGVFKTHSNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYG QMTAGSWIYIGSQGIVQGTYETFVEAGRQHYDGSLQGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLKTR YVDEQAKDLDDALARIKKYTAEGKAISIALCGNAADVLPELVRRGVRPDMVTDQTSAHDPLNGYLPKGWSWEEYRQRALT EPAQVVIAAKQSMAEHVEAMLAFQKMGVPTFDYGNNIRQMAKEMGVSNAFDFPGFVPAYIRPLFCRGVGPFRWAALSGDP QDIYKTDAMVKELIPDDEHLHRWLDMARERISFQGLPARICWVGLGQRAKLGLAFNEMVRSGELSAPIVIGRDHLDSGSV ASPNRETESMKDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAERIARVLHNDPATGV MRHADAGYDIAIECAREQGLNLPMVAATQGDKA >Mature_593_residues MLINPTHCYGVVIHPTALWDSAPILFEENAVTANNKVRNVEVRAPRGTKLNAKSWLTEAPLRMLMNNLDPEVAENPHELV VYGGIGRAARDWDCYDKIVATLKTLEDDETLLVQSGKPVGVFKTHSNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYG QMTAGSWIYIGSQGIVQGTYETFVEAGRQHYDGSLQGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLKTR YVDEQAKDLDDALARIKKYTAEGKAISIALCGNAADVLPELVRRGVRPDMVTDQTSAHDPLNGYLPKGWSWEEYRQRALT EPAQVVIAAKQSMAEHVEAMLAFQKMGVPTFDYGNNIRQMAKEMGVSNAFDFPGFVPAYIRPLFCRGVGPFRWAALSGDP QDIYKTDAMVKELIPDDEHLHRWLDMARERISFQGLPARICWVGLGQRAKLGLAFNEMVRSGELSAPIVIGRDHLDSGSV ASPNRETESMKDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAERIARVLHNDPATGV MRHADAGYDIAIECAREQGLNLPMVAATQGDKA
Specific function: Unknown
COG id: COG2987
COG function: function code E; Urocanate hydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urocanase family [H]
Homologues:
Organism=Homo sapiens, GI21389467, Length=572, Percent_Identity=33.041958041958, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI260306182, Length=220, Percent_Identity=36.3636363636364, Blast_Score=154, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71997891, Length=581, Percent_Identity=34.4234079173838, Blast_Score=330, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000193 [H]
Pfam domain/function: PF01175 Urocanase [H]
EC number: =4.2.1.49 [H]
Molecular weight: Translated: 64832; Mature: 64832
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS01233 UROCANASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINPTHCYGVVIHPTALWDSAPILFEENAVTANNKVRNVEVRAPRGTKLNAKSWLTEAP CCCCCCEEEEEEEECHHHCCCCCEEEECCEEECCCCEEEEEEECCCCCCCCHHHHHHHHH LRMLMNNLDPEVAENPHELVVYGGIGRAARDWDCYDKIVATLKTLEDDETLLVQSGKPVG HHHHHHHCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEE VFKTHSNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTY EEEECCCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCHHH ETFVEAGRQHYDGSLQGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLKTR HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEEEEEECCCCCEEEEEH YVDEQAKDLDDALARIKKYTAEGKAISIALCGNAADVLPELVRRGVRPDMVTDQTSAHDP HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC LNGYLPKGWSWEEYRQRALTEPAQVVIAAKQSMAEHVEAMLAFQKMGVPTFDYGNNIRQM CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AKEMGVSNAFDFPGFVPAYIRPLFCRGVGPFRWAALSGDPQDIYKTDAMVKELIPDDEHL HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHH HRWLDMARERISFQGLPARICWVGLGQRAKLGLAFNEMVRSGELSAPIVIGRDHLDSGSV HHHHHHHHHHHCCCCCCEEEEEEECCCCCEECHHHHHHHHCCCCCCCEEEECCCCCCCCC ASPNRETESMKDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDG CCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECC TDEAAERIARVLHNDPATGVMRHADAGYDIAIECAREQGLNLPMVAATQGDKA CHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEHHHCCCCCCEEEECCCCCC >Mature Secondary Structure MLINPTHCYGVVIHPTALWDSAPILFEENAVTANNKVRNVEVRAPRGTKLNAKSWLTEAP CCCCCCEEEEEEEECHHHCCCCCEEEECCEEECCCCEEEEEEECCCCCCCCHHHHHHHHH LRMLMNNLDPEVAENPHELVVYGGIGRAARDWDCYDKIVATLKTLEDDETLLVQSGKPVG HHHHHHHCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEE VFKTHSNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTY EEEECCCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCHHH ETFVEAGRQHYDGSLQGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLKTR HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEEEEEECCCCCEEEEEH YVDEQAKDLDDALARIKKYTAEGKAISIALCGNAADVLPELVRRGVRPDMVTDQTSAHDP HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC LNGYLPKGWSWEEYRQRALTEPAQVVIAAKQSMAEHVEAMLAFQKMGVPTFDYGNNIRQM CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AKEMGVSNAFDFPGFVPAYIRPLFCRGVGPFRWAALSGDPQDIYKTDAMVKELIPDDEHL HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHH HRWLDMARERISFQGLPARICWVGLGQRAKLGLAFNEMVRSGELSAPIVIGRDHLDSGSV HHHHHHHHHHHCCCCCCEEEEEEECCCCCEECHHHHHHHHCCCCCCCEEEECCCCCCCCC ASPNRETESMKDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDG CCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECC TDEAAERIARVLHNDPATGVMRHADAGYDIAIECAREQGLNLPMVAATQGDKA CHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEHHHCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA