| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is hutH [H]
Identifier: 157369044
GI number: 157369044
Start: 892579
End: 894102
Strand: Reverse
Name: hutH [H]
Synonym: Spro_0799
Alternate gene names: 157369044
Gene position: 894102-892579 (Counterclockwise)
Preceding gene: 157369045
Following gene: 157369035
Centisome position: 16.41
GC content: 61.09
Gene sequence:
>1524_bases ATGCACTACCCTATTTCGGTCACCCTCGACAACCTGCCGTTGCGCTGGCAAGACGTGGTGGCGGTAGCCAGATATCAGGC ACCGCTCAACCTGTCTGACGCTGCCTGGGCGCGTATCGACAATGCGCAGGCCATCGTTCAGAAAATTGTCGCCAGTGAAC AACGTGCCTATGGCGTCAATACCGGCCTGGGGGCGCTATGCAATCAGGCGCTGCACGGCGAACAATTGGCGCAACTGTCC CGCAACACGCTGATGAGTCACGCCTGCGGCGTAGGGGAACCGCTGAGCGATGAGCAGACCCGCGCCATTATCTGCTGCGC CATCGTCAACTATTGCCAGGGTAAGTCCGGCATTCAACGCCCGGTCGTAGAAGCGCTGCTGGCACTGCTTAACCGGGGGA TAACCCCGCGGGTGCCGTCGCAAGGGTCGGTCGGCTATCTGACCCATATGGCACACGTCGGCGTCGCGCTGCTCGGTCTG GGCGAAGTCAGCTACCGTGGCCAACTCGTCACCGCAGCCCAGGCTTTGGCGGAGGAAGGCATTGTGCCGCCACAGTTGGG CGCCAAAGATGGCCTGTGCCTGGTCAACGGCACGCCGTGCATGACGGGATTGAGCTGCCTGGCGCTGGCCGATGCCTGGC GGTTGGCCCGCTGGGCGGACGTGCTCGCGGCGATGAGCTTTGAAGCGCTGGGTGGACAGATCGCCGCCTTCGACAGCGAA ATCCTGGCACTGAAACCGCACCCGGGTATGCAACGGGTTGGCAGTAATTTGCGGATGTTATTGAACGGCAGCGAGATGAT TGCCGCCAGCAAGGGCATTCGTACCCAGGATGCGCTGAGCATCCGTTCAATCCCGCAGGTGCACGGTGCCTGCCGCGATC AAATTGCTCATGCAGAACGGCAGATTGAAATCGAGCTGAACGGCAATAGCGATAATCCCCTGCTGCTCGGTACGCCAGAC AACTATAGAGTGATGTCACAGGCCAACCCACACGGCGAGTCTGTGGCTATGGCCGCCGATCTGCTGGCGATTGCCATCGC CGAACTGGGTGGTATCGCAGAACGGCGCATTGATCGGCTGATTAACCCACTGGTCAGTGGCTTACCGGCATTTCTGGTCA GCGAGCCTGGGGTGAACTCAGGCATGATGATCGCTCAATACGTGGCGGCATCGCTGTGCGCGGAGAACCGCCAACTGGCA CAGCCTTGCGTGGTGGATAATTATGTGACCTCGGCGCTGCAGGAAGATCACCTCAGCCTGGGCACCGGGGCGGCGCTAAG GCTGCATAAGGCGCTGGGCAACATTAACCAGATCCTGGCGATTGAATACCTGCTGGCGGCACAGGCCTTTGAGTTCCTGC AGCAGCACCGTTTCGGTGACGGCACCCAACGTGCCTGGCAACGGCTGCGGCAAACAGTGGCCCCTTATCATCAGGATCGC TGGCTGGCACCGGATATCGCCAGCAGCGCCGCACTGCTGCAGGATGAACAGGCGCTGGCGGAGATTGCCCCGACGCTGCT GTAA
Upstream 100 bases:
>100_bases GATGAGTATGTTAACCGCTTCGTGCAACGCCGTCTGGCGCTGGATGAGAACGTACAGAAACCGCGCCCGATGATCGCGGC CCGTGCCTGAGGAGAGCAAT
Downstream 100 bases:
>100_bases TCCCCGCCCCTGCCCCCGTTCTGTACACCCACAGGGCGGGGGCATCGTGCTTAGCGCTGGGCCAAGGCCTGACGGATATC CGCCTGCAGATCGTCAGGAT
Product: histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MHYPISVTLDNLPLRWQDVVAVARYQAPLNLSDAAWARIDNAQAIVQKIVASEQRAYGVNTGLGALCNQALHGEQLAQLS RNTLMSHACGVGEPLSDEQTRAIICCAIVNYCQGKSGIQRPVVEALLALLNRGITPRVPSQGSVGYLTHMAHVGVALLGL GEVSYRGQLVTAAQALAEEGIVPPQLGAKDGLCLVNGTPCMTGLSCLALADAWRLARWADVLAAMSFEALGGQIAAFDSE ILALKPHPGMQRVGSNLRMLLNGSEMIAASKGIRTQDALSIRSIPQVHGACRDQIAHAERQIEIELNGNSDNPLLLGTPD NYRVMSQANPHGESVAMAADLLAIAIAELGGIAERRIDRLINPLVSGLPAFLVSEPGVNSGMMIAQYVAASLCAENRQLA QPCVVDNYVTSALQEDHLSLGTGAALRLHKALGNINQILAIEYLLAAQAFEFLQQHRFGDGTQRAWQRLRQTVAPYHQDR WLAPDIASSAALLQDEQALAEIAPTLL
Sequences:
>Translated_507_residues MHYPISVTLDNLPLRWQDVVAVARYQAPLNLSDAAWARIDNAQAIVQKIVASEQRAYGVNTGLGALCNQALHGEQLAQLS RNTLMSHACGVGEPLSDEQTRAIICCAIVNYCQGKSGIQRPVVEALLALLNRGITPRVPSQGSVGYLTHMAHVGVALLGL GEVSYRGQLVTAAQALAEEGIVPPQLGAKDGLCLVNGTPCMTGLSCLALADAWRLARWADVLAAMSFEALGGQIAAFDSE ILALKPHPGMQRVGSNLRMLLNGSEMIAASKGIRTQDALSIRSIPQVHGACRDQIAHAERQIEIELNGNSDNPLLLGTPD NYRVMSQANPHGESVAMAADLLAIAIAELGGIAERRIDRLINPLVSGLPAFLVSEPGVNSGMMIAQYVAASLCAENRQLA QPCVVDNYVTSALQEDHLSLGTGAALRLHKALGNINQILAIEYLLAAQAFEFLQQHRFGDGTQRAWQRLRQTVAPYHQDR WLAPDIASSAALLQDEQALAEIAPTLL >Mature_507_residues MHYPISVTLDNLPLRWQDVVAVARYQAPLNLSDAAWARIDNAQAIVQKIVASEQRAYGVNTGLGALCNQALHGEQLAQLS RNTLMSHACGVGEPLSDEQTRAIICCAIVNYCQGKSGIQRPVVEALLALLNRGITPRVPSQGSVGYLTHMAHVGVALLGL GEVSYRGQLVTAAQALAEEGIVPPQLGAKDGLCLVNGTPCMTGLSCLALADAWRLARWADVLAAMSFEALGGQIAAFDSE ILALKPHPGMQRVGSNLRMLLNGSEMIAASKGIRTQDALSIRSIPQVHGACRDQIAHAERQIEIELNGNSDNPLLLGTPD NYRVMSQANPHGESVAMAADLLAIAIAELGGIAERRIDRLINPLVSGLPAFLVSEPGVNSGMMIAQYVAASLCAENRQLA QPCVVDNYVTSALQEDHLSLGTGAALRLHKALGNINQILAIEYLLAAQAFEFLQQHRFGDGTQRAWQRLRQTVAPYHQDR WLAPDIASSAALLQDEQALAEIAPTLL
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=509, Percent_Identity=36.9351669941061, Blast_Score=322, Evalue=5e-88, Organism=Caenorhabditis elegans, GI17567831, Length=508, Percent_Identity=35.8267716535433, Blast_Score=279, Evalue=3e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 54239; Mature: 54239
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYPISVTLDNLPLRWQDVVAVARYQAPLNLSDAAWARIDNAQAIVQKIVASEQRAYGVN CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC TGLGALCNQALHGEQLAQLSRNTLMSHACGVGEPLSDEQTRAIICCAIVNYCQGKSGIQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH PVVEALLALLNRGITPRVPSQGSVGYLTHMAHVGVALLGLGEVSYRGQLVTAAQALAEEG HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC IVPPQLGAKDGLCLVNGTPCMTGLSCLALADAWRLARWADVLAAMSFEALGGQIAAFDSE CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC ILALKPHPGMQRVGSNLRMLLNGSEMIAASKGIRTQDALSIRSIPQVHGACRDQIAHAER EEEECCCCCHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCE QIEIELNGNSDNPLLLGTPDNYRVMSQANPHGESVAMAADLLAIAIAELGGIAERRIDRL EEEEEEECCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH INPLVSGLPAFLVSEPGVNSGMMIAQYVAASLCAENRQLAQPCVVDNYVTSALQEDHLSL HHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCC GTGAALRLHKALGNINQILAIEYLLAAQAFEFLQQHRFGDGTQRAWQRLRQTVAPYHQDR CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCC WLAPDIASSAALLQDEQALAEIAPTLL CCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHYPISVTLDNLPLRWQDVVAVARYQAPLNLSDAAWARIDNAQAIVQKIVASEQRAYGVN CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC TGLGALCNQALHGEQLAQLSRNTLMSHACGVGEPLSDEQTRAIICCAIVNYCQGKSGIQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH PVVEALLALLNRGITPRVPSQGSVGYLTHMAHVGVALLGLGEVSYRGQLVTAAQALAEEG HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC IVPPQLGAKDGLCLVNGTPCMTGLSCLALADAWRLARWADVLAAMSFEALGGQIAAFDSE CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC ILALKPHPGMQRVGSNLRMLLNGSEMIAASKGIRTQDALSIRSIPQVHGACRDQIAHAER EEEECCCCCHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCE QIEIELNGNSDNPLLLGTPDNYRVMSQANPHGESVAMAADLLAIAIAELGGIAERRIDRL EEEEEEECCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH INPLVSGLPAFLVSEPGVNSGMMIAQYVAASLCAENRQLAQPCVVDNYVTSALQEDHLSL HHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCC GTGAALRLHKALGNINQILAIEYLLAAQAFEFLQQHRFGDGTQRAWQRLRQTVAPYHQDR CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCC WLAPDIASSAALLQDEQALAEIAPTLL CCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA