| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ygaW [H]
Identifier: 157368996
GI number: 157368996
Start: 838318
End: 838758
Strand: Reverse
Name: ygaW [H]
Synonym: Spro_0751
Alternate gene names: 157368996
Gene position: 838758-838318 (Counterclockwise)
Preceding gene: 157369013
Following gene: 157368990
Centisome position: 15.39
GC content: 55.33
Gene sequence:
>441_bases ATGCTTTCGCCTGTTGCTCACTGGCGCAGCGCCGCTGCCGATACCTTTGCACTGGTGGTGTACTGTTTCATCGCCGGTAT GGCGATAGAAATCCTGGTGTCCGGCATGAGCTTTCAACAATCACTCTCGTCCCGCTTGCTGTCGATCCCGGTAAATATCT TGATCGCCTGGCCCTATGGGCGCTATCGCGATCTGTTTATCCGTGTCGCCAGGCGCTTTCAACGCCAACCTTTTTTACTG CGTAACCTGGCCGATCTGTTGGCCTATGTCAGTTTCCAATCACCGGTCTATGCCGCCATCTTATGGAGCGTCGGCGCCGA TGGGCAACAAATCATCACGGCGGTGACCAGCAACGCGGTGGTGTCGATGGCAATGGGCGTGGTGTATGGCTATTTTCTGG AATACTGCAGAAGGTTGTTCAGGGTGGCGGGCTACGTGTGA
Upstream 100 bases:
>100_bases AAGGCAGAAGTGTAAACTAAAAGAAGAATAAAAAACCAGATTTAACACCTGAAAATAACAATTTAACAGAACATTAACCA ATAATCATGGAGATTGCATC
Downstream 100 bases:
>100_bases AGCAGGAGCGCAACGGGGCGCTCCTGTTTGGGTTTACTTCCGGCTAAGGCTGCCGCGGCGGAACAAATTACGACGGATAC GCGTCAGACCCGGCTTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLSPVAHWRSAAADTFALVVYCFIAGMAIEILVSGMSFQQSLSSRLLSIPVNILIAWPYGRYRDLFIRVARRFQRQPFLL RNLADLLAYVSFQSPVYAAILWSVGADGQQIITAVTSNAVVSMAMGVVYGYFLEYCRRLFRVAGYV
Sequences:
>Translated_146_residues MLSPVAHWRSAAADTFALVVYCFIAGMAIEILVSGMSFQQSLSSRLLSIPVNILIAWPYGRYRDLFIRVARRFQRQPFLL RNLADLLAYVSFQSPVYAAILWSVGADGQQIITAVTSNAVVSMAMGVVYGYFLEYCRRLFRVAGYV >Mature_146_residues MLSPVAHWRSAAADTFALVVYCFIAGMAIEILVSGMSFQQSLSSRLLSIPVNILIAWPYGRYRDLFIRVARRFQRQPFLL RNLADLLAYVSFQSPVYAAILWSVGADGQQIITAVTSNAVVSMAMGVVYGYFLEYCRRLFRVAGYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789025, Length=145, Percent_Identity=64.8275862068965, Blast_Score=191, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010574 - ProDom: PD090021 [H]
Pfam domain/function: PF06610 DUF1144 [H]
EC number: NA
Molecular weight: Translated: 16386; Mature: 16386
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPVAHWRSAAADTFALVVYCFIAGMAIEILVSGMSFQQSLSSRLLSIPVNILIAWPYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEECCCC RYRDLFIRVARRFQRQPFLLRNLADLLAYVSFQSPVYAAILWSVGADGQQIITAVTSNAV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH VSMAMGVVYGYFLEYCRRLFRVAGYV HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSPVAHWRSAAADTFALVVYCFIAGMAIEILVSGMSFQQSLSSRLLSIPVNILIAWPYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEECCCC RYRDLFIRVARRFQRQPFLLRNLADLLAYVSFQSPVYAAILWSVGADGQQIITAVTSNAV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH VSMAMGVVYGYFLEYCRRLFRVAGYV HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]