| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is thiP [H]
Identifier: 157368981
GI number: 157368981
Start: 818033
End: 819640
Strand: Reverse
Name: thiP [H]
Synonym: Spro_0736
Alternate gene names: 157368981
Gene position: 819640-818033 (Counterclockwise)
Preceding gene: 157368982
Following gene: 157368980
Centisome position: 15.04
GC content: 61.57
Gene sequence:
>1608_bases ATGGCAAACCGCCGTCAGCCACTGATCCCACGCTGGCTATGGCCGGGGCTGCTGGCTTCCGGTCTGATCCTGACCATCGC CGTACTGGCGATGGGTTCGCTGTGGCGACACGCGCCCGAAAGCGACTGGCAGGGTCTGTGGCAGGACAGCTACCTGTGGC ACGTGGTGCGTTTCACCTTCTGGCAGGCGTTGCTGTCGGCACTGATCTCGGTGCTGCCCGCTATCTTGCTGGCGCGAGCG CTGTTCCGTCGCCGTTTCCCTGGCCGCCAATTGCTGCTACGGCTGTGCGCCATGACGCTGGTGCTGCCGGTACTGGTGGC GGTGTTCGGTCTGCTCAGTGTTTATGGCCGACAAGGCTGGCTGGCCGCAATATGCGGTTGGCTCGGCATTAACTACAGTT TCTCCCCCTATGGCCTGCAGGGCATTCTGTTGGCCCATATGTTCTTCAACCTGCCGCTGGCGACCCGCCTGCTGTTACAG GCGCTGGAAAACATTCCGGTCGAACAGCGTCAACTGGCTGCGCAGCTTGGCATGAGCGGGCGGCAGCAGTTCCGCTTTGT CGAGTGGCCGGCACTACGCCGCCAGATCCTGCCGAGCGGTGCGCTGATCTTTATGCTGTGCTTTGCCAGTTTCGCCACCG TATTGTCACTGGGCGGCGGGCCGCAGGCCACCACCATCGAACTGGCGATCTACCAGGCACTCAGCTACGACTACGATCTC AGCCGCGCCGCGCTATTGGCGCTGATCCAACTGGCCTGCTGCCTGGGGCTGGTGGTGCTCAGCCAGCGGTTAAGCCAGGC ACTCCCCGTTGGTAACACGCACGCCCACATCTGGCGTAATCCGGAAGACAGCCTGTGGCGCCGCGTTAGCGATTTTCTGC TGATCGCTGCCGCCCTGCTACTGCTGTTACCCCCACTGCTGGCGGTGATTGCCGACGGTGCCAACCAAAGCCTGGTCAGC GTGCTGCAACAGCCTGTGCTGTGGCAGGCGTTATTCACCTCATTACGCATTGCTCTCGGTGCCGGCGTACTGTGCGTGCT ACTGACCATGATGCTGCTGTGGAGCAGTCGTGAGCTGAAGCTGCAACAGCGGCTGCGCTGGGGCCAACGACTTGAACTAA GTGGCATGGTGATCCTGGCAATGCCAGGCATCGTGCTGGCGACCGGTTTCTTCCTGCTGTTGAGTGACACCGTCGGGCTG CCGCAGTCGCCGTATGCGCTGGTGATCCTTACCAATGCACTGATGGCGGTGCCCTACGCGCTGAAAGTGCTGGAAAACCC GATGCGCGACCTGGCCGAACGCTACAACCCACTGTGCCTGTCGCTGGATATCCACGGCTGGCAGCGACTGCGGCTTATCG AACTGAAAGCATTGCGCCGCCCACTGGCCCAGGCGCTGGCCTTCGCCTGCGTACTGTCGATTGGCGATTTCGGCGTCGTC GCCCTGTTCGGCAACGAGCACTTCCGCACTCTGCCTTACTACCTGTATCAACAGATCGGTGCCTATCGCAGCAATGATGG CGCGGTCACCGCCCTGCTGTTGCTGCTGTTATGCTTCCTGCTGTTTACCCTGATTGAACGCTTACCGGGCCGCCATGATA GAGCTTGA
Upstream 100 bases:
>100_bases CCCAGCTGCCGGCCGGGTTTGAGCAAATGACCGTACCGCAGACCGCGTTGCAATACAGCGCTGAAGAAGTGGCCAAACAA CGCGGCAACTGGATCCGGGC
Downstream 100 bases:
>100_bases AAAACTGACCTACCTGTATGAACACCTGCCGATGCGCTTTGACCTGCGCATTGCGCCTGGCGAACGTGTTGCGGTACTTG GCCCCAGCGGCGCGGGCAAA
Product: thiamine transporter membrane protein
Products: ADP; phosphate; thiamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MANRRQPLIPRWLWPGLLASGLILTIAVLAMGSLWRHAPESDWQGLWQDSYLWHVVRFTFWQALLSALISVLPAILLARA LFRRRFPGRQLLLRLCAMTLVLPVLVAVFGLLSVYGRQGWLAAICGWLGINYSFSPYGLQGILLAHMFFNLPLATRLLLQ ALENIPVEQRQLAAQLGMSGRQQFRFVEWPALRRQILPSGALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDL SRAALLALIQLACCLGLVVLSQRLSQALPVGNTHAHIWRNPEDSLWRRVSDFLLIAAALLLLLPPLLAVIADGANQSLVS VLQQPVLWQALFTSLRIALGAGVLCVLLTMMLLWSSRELKLQQRLRWGQRLELSGMVILAMPGIVLATGFFLLLSDTVGL PQSPYALVILTNALMAVPYALKVLENPMRDLAERYNPLCLSLDIHGWQRLRLIELKALRRPLAQALAFACVLSIGDFGVV ALFGNEHFRTLPYYLYQQIGAYRSNDGAVTALLLLLLCFLLFTLIERLPGRHDRA
Sequences:
>Translated_535_residues MANRRQPLIPRWLWPGLLASGLILTIAVLAMGSLWRHAPESDWQGLWQDSYLWHVVRFTFWQALLSALISVLPAILLARA LFRRRFPGRQLLLRLCAMTLVLPVLVAVFGLLSVYGRQGWLAAICGWLGINYSFSPYGLQGILLAHMFFNLPLATRLLLQ ALENIPVEQRQLAAQLGMSGRQQFRFVEWPALRRQILPSGALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDL SRAALLALIQLACCLGLVVLSQRLSQALPVGNTHAHIWRNPEDSLWRRVSDFLLIAAALLLLLPPLLAVIADGANQSLVS VLQQPVLWQALFTSLRIALGAGVLCVLLTMMLLWSSRELKLQQRLRWGQRLELSGMVILAMPGIVLATGFFLLLSDTVGL PQSPYALVILTNALMAVPYALKVLENPMRDLAERYNPLCLSLDIHGWQRLRLIELKALRRPLAQALAFACVLSIGDFGVV ALFGNEHFRTLPYYLYQQIGAYRSNDGAVTALLLLLLCFLLFTLIERLPGRHDRA >Mature_534_residues ANRRQPLIPRWLWPGLLASGLILTIAVLAMGSLWRHAPESDWQGLWQDSYLWHVVRFTFWQALLSALISVLPAILLARAL FRRRFPGRQLLLRLCAMTLVLPVLVAVFGLLSVYGRQGWLAAICGWLGINYSFSPYGLQGILLAHMFFNLPLATRLLLQA LENIPVEQRQLAAQLGMSGRQQFRFVEWPALRRQILPSGALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDLS RAALLALIQLACCLGLVVLSQRLSQALPVGNTHAHIWRNPEDSLWRRVSDFLLIAAALLLLLPPLLAVIADGANQSLVSV LQQPVLWQALFTSLRIALGAGVLCVLLTMMLLWSSRELKLQQRLRWGQRLELSGMVILAMPGIVLATGFFLLLSDTVGLP QSPYALVILTNALMAVPYALKVLENPMRDLAERYNPLCLSLDIHGWQRLRLIELKALRRPLAQALAFACVLSIGDFGVVA LFGNEHFRTLPYYLYQQIGAYRSNDGAVTALLLLLLCFLLFTLIERLPGRHDRA
Specific function: Part of the ABC transporter complex thiBPQ involved in thiamine import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1786254, Length=535, Percent_Identity=74.5794392523364, Blast_Score=726, Evalue=0.0, Organism=Escherichia coli, GI87082099, Length=233, Percent_Identity=27.4678111587983, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005947 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 59698; Mature: 59567
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRRQPLIPRWLWPGLLASGLILTIAVLAMGSLWRHAPESDWQGLWQDSYLWHVVRFTF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHH WQALLSALISVLPAILLARALFRRRFPGRQLLLRLCAMTLVLPVLVAVFGLLSVYGRQGW HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LAAICGWLGINYSFSPYGLQGILLAHMFFNLPLATRLLLQALENIPVEQRQLAAQLGMSG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC RQQFRFVEWPALRRQILPSGALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDL HHHCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH SRAALLALIQLACCLGLVVLSQRLSQALPVGNTHAHIWRNPEDSLWRRVSDFLLIAAALL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH LLLPPLLAVIADGANQSLVSVLQQPVLWQALFTSLRIALGAGVLCVLLTMMLLWSSRELK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LQQRLRWGQRLELSGMVILAMPGIVLATGFFLLLSDTVGLPQSPYALVILTNALMAVPYA HHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LKVLENPMRDLAERYNPLCLSLDIHGWQRLRLIELKALRRPLAQALAFACVLSIGDFGVV HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ALFGNEHFRTLPYYLYQQIGAYRSNDGAVTALLLLLLCFLLFTLIERLPGRHDRA EEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ANRRQPLIPRWLWPGLLASGLILTIAVLAMGSLWRHAPESDWQGLWQDSYLWHVVRFTF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHH WQALLSALISVLPAILLARALFRRRFPGRQLLLRLCAMTLVLPVLVAVFGLLSVYGRQGW HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LAAICGWLGINYSFSPYGLQGILLAHMFFNLPLATRLLLQALENIPVEQRQLAAQLGMSG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC RQQFRFVEWPALRRQILPSGALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDL HHHCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH SRAALLALIQLACCLGLVVLSQRLSQALPVGNTHAHIWRNPEDSLWRRVSDFLLIAAALL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH LLLPPLLAVIADGANQSLVSVLQQPVLWQALFTSLRIALGAGVLCVLLTMMLLWSSRELK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LQQRLRWGQRLELSGMVILAMPGIVLATGFFLLLSDTVGLPQSPYALVILTNALMAVPYA HHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LKVLENPMRDLAERYNPLCLSLDIHGWQRLRLIELKALRRPLAQALAFACVLSIGDFGVV HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ALFGNEHFRTLPYYLYQQIGAYRSNDGAVTALLLLLLCFLLFTLIERLPGRHDRA EEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; thiamine [Periplasm]; H2O [C]
Specific reaction: ATP + thiamine [Periplasm] + H2O = ADP + phosphate + thiamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1630901; 9278503; 9535878 [H]