| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is ilvB [H]
Identifier: 157368979
GI number: 157368979
Start: 815331
End: 817025
Strand: Reverse
Name: ilvB [H]
Synonym: Spro_0734
Alternate gene names: 157368979
Gene position: 817025-815331 (Counterclockwise)
Preceding gene: 157368980
Following gene: 157368978
Centisome position: 14.99
GC content: 61.0
Gene sequence:
>1695_bases ATGGCAATTTCGGGCACGCCACAGCAAGGCAACAGCTTCACCGGCGCACAGTTGATCGTCCACCTGTTGGAACGTCAGGG CATCACCACCGTTGCCGGTATTCCCGGCGGCGCTGCACTGCCGCTGTATGACGCACTGAGCCAAAGCACCCGCATTCATC ACGTACTGGCCCGCCACGAACAGGGCGCGGGCTTTATGGCACAGGGCATGGCACGCGCCAATGGCAAGGCGGCGGTGTGC ATCGCCTCCAGCGGGCCGGGGGCCACCAACCTGGTCACCGCTATCGCCGACGCCAAGCTCGATTCCATCCCGCTGGTGTG TATCACCGGCCAGGTGCCGTCTTCGATGATCGGTACCGACGCCTTCCAGGAAGTGGATACCTACGGCATCTCGATTCCTA TCACCAAGCACAACCATTTGGTTCGCGATATCCGTGAACTGCCGCAGGTGATTTGCGACGCGTTCCGTATTGCCGAATCC GGCCGCCCTGGCCCGGTGTGGATCGACGTGCCGAAAGACGTGCAAACCGCGGTGATCACTCTGGATGAACTGCCGCCGAT AGCTATTCCCGACGCGGCACCGGCCTTTGAAGCCTCGGCGGTAGCGCAGGCCGCCGCGATGATCAATCAGGCCAAACGCC CGGTATTGTATCTGGGTGGCGGCATCATCTGCGCCAATGCTCACCAACAGGCGATTGAGCTGGCGGAACGCGCCAACCTG CCGACCACCATGACGCTGATGGCGTTGGGTGCCATGCCGGTGCAGCACCCGCTGTCGCTGGGTATGCTGGGGATGCATGC CGCACGCAGCACCAACTTTATTCTGCAAGAGGCCGATCTGCTGATCGTACTGGGTGCCCGCTTTGACGATCGGGCGATTG GCAAAACCGAACAGTTCTGCCCGAACGCCGCCATCATTCACGTGGATATCGACCGTGCCGAACTGGGCAAGGTGAAGCAG GCCAACATTGCCATTCACGCCGACGTTGGCCAGGTATTGCAACAGCTGTTACCACAGATTGAGGCACAGCCGCGCAGCGA ATGGCTGGACACCGTCAACGGCCTGAAGCGCGAGTTTCCGTTCAGCATGCCGAACGCCGAAGACCCTCTGAGCCACTATG GGCTGGTGCTGGCTGCTGCGCGCTGCGTGGATGAAAGCGCCATTATCACCACCGACGTCGGCCAGCATCAGATGTGGGTG GCGCAGGCCTACCCGCTGAGCCGTCCGCGCCAGTGGCTGACCTCCGGCGGATTGGGCACCATGGGCTTCGGCCTGCCTGC AGCGATAGGTGCAGCCCTGGCCGAACCGCAGCGCAAGGTGCTGTGCTTCTCCGGTGACGGCAGCCTGATGATGAACATTC AGGAAATGGCCACCGCCGTCGAGCATGATCTGGACGTGAAAATTATCCTGATGAACAACCAGGCGTTGGGGCTGGTGCAT CAGCAGCAAACGCTGTTCTACCAGCAGCGCATCTTTGCCGCCGCCTATCCCAAGCGTACCGACTTTATCAAGATTGCCGC CGGTTTCGGGCTGGACACCTGTGATTTGAACGCCGCAGAAGATCCGCAAGCCGCGCTGGCCGAGGCGATCCAACGGCCTG GCCCTTGTTTGATCCACGCGCTGATTGATATCAATGAAAAAGTGTTCCCGATGGTGCCGCCGGGTGCCGCCAACATCGAC ATGATTGGAGAATAA
Upstream 100 bases:
>100_bases ACGCATCGATTCCCAAACCCCGCCGGCGCAAACCGGGCGGGGTTTTTAGTTTCAGTCCCCTGCCCAGAAAAGCGAACCGG CCTTGAGAAAGGATAGGAAC
Downstream 100 bases:
>100_bases GCCATGTCAGAACAATTGAATAATCCACAGGTGATCCTGGAACTGACGGTACGTAACCATCCCGGCGTGATGTCGCACGT GTGCGGCCTGTTTGCCCGCC
Product: acetolactate synthase catalytic subunit
Products: NA
Alternate protein names: AHAS-I; Acetohydroxy-acid synthase I large subunit; ALS-I [H]
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MAISGTPQQGNSFTGAQLIVHLLERQGITTVAGIPGGAALPLYDALSQSTRIHHVLARHEQGAGFMAQGMARANGKAAVC IASSGPGATNLVTAIADAKLDSIPLVCITGQVPSSMIGTDAFQEVDTYGISIPITKHNHLVRDIRELPQVICDAFRIAES GRPGPVWIDVPKDVQTAVITLDELPPIAIPDAAPAFEASAVAQAAAMINQAKRPVLYLGGGIICANAHQQAIELAERANL PTTMTLMALGAMPVQHPLSLGMLGMHAARSTNFILQEADLLIVLGARFDDRAIGKTEQFCPNAAIIHVDIDRAELGKVKQ ANIAIHADVGQVLQQLLPQIEAQPRSEWLDTVNGLKREFPFSMPNAEDPLSHYGLVLAAARCVDESAIITTDVGQHQMWV AQAYPLSRPRQWLTSGGLGTMGFGLPAAIGAALAEPQRKVLCFSGDGSLMMNIQEMATAVEHDLDVKIILMNNQALGLVH QQQTLFYQQRIFAAAYPKRTDFIKIAAGFGLDTCDLNAAEDPQAALAEAIQRPGPCLIHALIDINEKVFPMVPPGAANID MIGE
Sequences:
>Translated_564_residues MAISGTPQQGNSFTGAQLIVHLLERQGITTVAGIPGGAALPLYDALSQSTRIHHVLARHEQGAGFMAQGMARANGKAAVC IASSGPGATNLVTAIADAKLDSIPLVCITGQVPSSMIGTDAFQEVDTYGISIPITKHNHLVRDIRELPQVICDAFRIAES GRPGPVWIDVPKDVQTAVITLDELPPIAIPDAAPAFEASAVAQAAAMINQAKRPVLYLGGGIICANAHQQAIELAERANL PTTMTLMALGAMPVQHPLSLGMLGMHAARSTNFILQEADLLIVLGARFDDRAIGKTEQFCPNAAIIHVDIDRAELGKVKQ ANIAIHADVGQVLQQLLPQIEAQPRSEWLDTVNGLKREFPFSMPNAEDPLSHYGLVLAAARCVDESAIITTDVGQHQMWV AQAYPLSRPRQWLTSGGLGTMGFGLPAAIGAALAEPQRKVLCFSGDGSLMMNIQEMATAVEHDLDVKIILMNNQALGLVH QQQTLFYQQRIFAAAYPKRTDFIKIAAGFGLDTCDLNAAEDPQAALAEAIQRPGPCLIHALIDINEKVFPMVPPGAANID MIGE >Mature_563_residues AISGTPQQGNSFTGAQLIVHLLERQGITTVAGIPGGAALPLYDALSQSTRIHHVLARHEQGAGFMAQGMARANGKAAVCI ASSGPGATNLVTAIADAKLDSIPLVCITGQVPSSMIGTDAFQEVDTYGISIPITKHNHLVRDIRELPQVICDAFRIAESG RPGPVWIDVPKDVQTAVITLDELPPIAIPDAAPAFEASAVAQAAAMINQAKRPVLYLGGGIICANAHQQAIELAERANLP TTMTLMALGAMPVQHPLSLGMLGMHAARSTNFILQEADLLIVLGARFDDRAIGKTEQFCPNAAIIHVDIDRAELGKVKQA NIAIHADVGQVLQQLLPQIEAQPRSEWLDTVNGLKREFPFSMPNAEDPLSHYGLVLAAARCVDESAIITTDVGQHQMWVA QAYPLSRPRQWLTSGGLGTMGFGLPAAIGAALAEPQRKVLCFSGDGSLMMNIQEMATAVEHDLDVKIILMNNQALGLVHQ QQTLFYQQRIFAAAYPKRTDFIKIAAGFGLDTCDLNAAEDPQAALAEAIQRPGPCLIHALIDINEKVFPMVPPGAANIDM IGE
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=493, Percent_Identity=27.9918864097363, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI21361361, Length=554, Percent_Identity=25.812274368231, Blast_Score=143, Evalue=5e-34, Organism=Escherichia coli, GI1790104, Length=564, Percent_Identity=75.531914893617, Blast_Score=866, Evalue=0.0, Organism=Escherichia coli, GI87081685, Length=563, Percent_Identity=39.9644760213144, Blast_Score=433, Evalue=1e-122, Organism=Escherichia coli, GI1786717, Length=528, Percent_Identity=32.7651515151515, Blast_Score=291, Evalue=6e-80, Organism=Escherichia coli, GI1787096, Length=548, Percent_Identity=27.5547445255474, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1788716, Length=553, Percent_Identity=25.6781193490054, Blast_Score=146, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17542570, Length=568, Percent_Identity=25.3521126760563, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17531299, Length=565, Percent_Identity=25.3097345132743, Blast_Score=145, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17531301, Length=565, Percent_Identity=25.3097345132743, Blast_Score=144, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6323755, Length=582, Percent_Identity=42.4398625429553, Blast_Score=442, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6320816, Length=543, Percent_Identity=25.9668508287293, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6321524, Length=490, Percent_Identity=22.2448979591837, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323163, Length=490, Percent_Identity=23.265306122449, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI19922626, Length=483, Percent_Identity=29.8136645962733, Blast_Score=171, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 60051; Mature: 59920
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISGTPQQGNSFTGAQLIVHLLERQGITTVAGIPGGAALPLYDALSQSTRIHHVLARHE CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC QGAGFMAQGMARANGKAAVCIASSGPGATNLVTAIADAKLDSIPLVCITGQVPSSMIGTD CCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCH AFQEVDTYGISIPITKHNHLVRDIRELPQVICDAFRIAESGRPGPVWIDVPKDVQTAVIT HHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE LDELPPIAIPDAAPAFEASAVAQAAAMINQAKRPVLYLGGGIICANAHQQAIELAERANL ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCHHHHHHHHHHCCC PTTMTLMALGAMPVQHPLSLGMLGMHAARSTNFILQEADLLIVLGARFDDRAIGKTEQFC CHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCCHHHHC PNAAIIHVDIDRAELGKVKQANIAIHADVGQVLQQLLPQIEAQPRSEWLDTVNGLKREFP CCCEEEEEECCHHHHCCEEECCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC FSMPNAEDPLSHYGLVLAAARCVDESAIITTDVGQHQMWVAQAYPLSRPRQWLTSGGLGT CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHCCCCCC MGFGLPAAIGAALAEPQRKVLCFSGDGSLMMNIQEMATAVEHDLDVKIILMNNQALGLVH CCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCCEEEEEECCCEEEEEH QQQTLFYQQRIFAAAYPKRTDFIKIAAGFGLDTCDLNAAEDPQAALAEAIQRPGPCLIHA HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE LIDINEKVFPMVPPGAANIDMIGE EECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AISGTPQQGNSFTGAQLIVHLLERQGITTVAGIPGGAALPLYDALSQSTRIHHVLARHE CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC QGAGFMAQGMARANGKAAVCIASSGPGATNLVTAIADAKLDSIPLVCITGQVPSSMIGTD CCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCH AFQEVDTYGISIPITKHNHLVRDIRELPQVICDAFRIAESGRPGPVWIDVPKDVQTAVIT HHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE LDELPPIAIPDAAPAFEASAVAQAAAMINQAKRPVLYLGGGIICANAHQQAIELAERANL ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCHHHHHHHHHHCCC PTTMTLMALGAMPVQHPLSLGMLGMHAARSTNFILQEADLLIVLGARFDDRAIGKTEQFC CHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCCHHHHC PNAAIIHVDIDRAELGKVKQANIAIHADVGQVLQQLLPQIEAQPRSEWLDTVNGLKREFP CCCEEEEEECCHHHHCCEEECCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC FSMPNAEDPLSHYGLVLAAARCVDESAIITTDVGQHQMWVAQAYPLSRPRQWLTSGGLGT CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHCCCCCC MGFGLPAAIGAALAEPQRKVLCFSGDGSLMMNIQEMATAVEHDLDVKIILMNNQALGLVH CCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCCEEEEEECCCEEEEEH QQQTLFYQQRIFAAAYPKRTDFIKIAAGFGLDTCDLNAAEDPQAALAEAIQRPGPCLIHA HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE LIDINEKVFPMVPPGAANIDMIGE EECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2989782; 2989781; 7686882; 9278503 [H]