| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yaaA [C]
Identifier: 157368931
GI number: 157368931
Start: 755711
End: 756484
Strand: Reverse
Name: yaaA [C]
Synonym: Spro_0686
Alternate gene names: 157368931
Gene position: 756484-755711 (Counterclockwise)
Preceding gene: 157368932
Following gene: 157368926
Centisome position: 13.88
GC content: 52.45
Gene sequence:
>774_bases ATGCTCGTTATTATTTCACCTGCAAAAACTCTTGATTACGAAAGCCCACTGGCAACCGAACGCTTCACCCAGCCGGAACT GCTGGATAAATCGAAGCAGTTGATCAAAATCTGCCGCGATCTGACGCCGGTACAAATCTCCAAGCTGATGGGCATCAGCG ATAAACTGGCCGGCCTGAACGCCGCTCGCTTTGGCGACTGGCAACCGAAATTCACCCCGGAAAATGCCCGCCAGGCCCTG CTGGCGTTTAAAGGCGACGTTTATACCGGCCTGCACGCGCAGGACTTCAGCGAAGATGACTTTGATTTCGCCCAACAGCA TCTGCGTATGCTGTCCGGGCTGTACGGCGTGCTGCGCCCGCTTGATCTGATGATGCCTTACCGTCTGGAGATGGGCATCA AACTGGACAATGCCAAGGGCAAGGATTTGTACAGTTTCTGGGGCGAGCAAATCACCAAAAAACTTAATGAAGCGCTGGAG CAACAAGGTGACGATGTGGTGGTCAACCTGGCTTCCGACGAATACTTCAAATCGGTGAAACCGGCTAAACTGCACGGCGA GCTGATTAAACCGGTGTTCCTCGACGAGAAAAACGGCAAATACAAAGTGATCAGCTTCTACGCCAAGAAGGCGCGCGGAC TGATGAGCCGCTTTATCATCAAAAATCGTCTGACGCAGCGCGAACAACTGCTTGATTTCAATCTGGAAGGCTACGCATTT GACGAAGCCAATTCCCAAGGCAACGAGCTGGTGTTCAAACGCCCAGAGCAGTGA
Upstream 100 bases:
>100_bases TACGGGCGCGTCAAACGCGCGCCCTGCCTATCAGACCCATTGACCCTTTTTCCCGCGCTTTTTGCTACAGTAGCGGTTCT TGGAAAAACAGGATCTGGCC
Downstream 100 bases:
>100_bases AACTCCCGCCCATAAAAAAGCCGTCACACGGACGGCTTGAGTTTGATGACAAAGTGGTCTTTGAATCCGAGATACCCGGG CCTAGCGCACCGAGGGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MLVIISPAKTLDYESPLATERFTQPELLDKSKQLIKICRDLTPVQISKLMGISDKLAGLNAARFGDWQPKFTPENARQAL LAFKGDVYTGLHAQDFSEDDFDFAQQHLRMLSGLYGVLRPLDLMMPYRLEMGIKLDNAKGKDLYSFWGEQITKKLNEALE QQGDDVVVNLASDEYFKSVKPAKLHGELIKPVFLDEKNGKYKVISFYAKKARGLMSRFIIKNRLTQREQLLDFNLEGYAF DEANSQGNELVFKRPEQ
Sequences:
>Translated_257_residues MLVIISPAKTLDYESPLATERFTQPELLDKSKQLIKICRDLTPVQISKLMGISDKLAGLNAARFGDWQPKFTPENARQAL LAFKGDVYTGLHAQDFSEDDFDFAQQHLRMLSGLYGVLRPLDLMMPYRLEMGIKLDNAKGKDLYSFWGEQITKKLNEALE QQGDDVVVNLASDEYFKSVKPAKLHGELIKPVFLDEKNGKYKVISFYAKKARGLMSRFIIKNRLTQREQLLDFNLEGYAF DEANSQGNELVFKRPEQ >Mature_257_residues MLVIISPAKTLDYESPLATERFTQPELLDKSKQLIKICRDLTPVQISKLMGISDKLAGLNAARFGDWQPKFTPENARQAL LAFKGDVYTGLHAQDFSEDDFDFAQQHLRMLSGLYGVLRPLDLMMPYRLEMGIKLDNAKGKDLYSFWGEQITKKLNEALE QQGDDVVVNLASDEYFKSVKPAKLHGELIKPVFLDEKNGKYKVISFYAKKARGLMSRFIIKNRLTQREQLLDFNLEGYAF DEANSQGNELVFKRPEQ
Specific function: Unknown
COG id: COG3022
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0246 family
Homologues:
Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=78.5992217898833, Blast_Score=416, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y686_SERP5 (A8G9K2)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001476920.1 - STRING: A8G9K2 - GeneID: 5605604 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0686 - eggNOG: COG3022 - HOGENOM: HBG672409 - OMA: ISFYAKR - ProtClustDB: PRK02101 - BioCyc: SPRO399741:SPRO_0686-MONOMER - HAMAP: MF_00652 - InterPro: IPR005583
Pfam domain/function: PF03883 DUF328
EC number: NA
Molecular weight: Translated: 29392; Mature: 29392
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIISPAKTLDYESPLATERFTQPELLDKSKQLIKICRDLTPVQISKLMGISDKLAGLN CEEEECCHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCC AARFGDWQPKFTPENARQALLAFKGDVYTGLHAQDFSEDDFDFAQQHLRMLSGLYGVLRP HHHCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LDLMMPYRLEMGIKLDNAKGKDLYSFWGEQITKKLNEALEQQGDDVVVNLASDEYFKSVK HHHHCCHHEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCC PAKLHGELIKPVFLDEKNGKYKVISFYAKKARGLMSRFIIKNRLTQREQLLDFNLEGYAF CHHHHHHHHCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE DEANSQGNELVFKRPEQ CCCCCCCCEEEEECCCC >Mature Secondary Structure MLVIISPAKTLDYESPLATERFTQPELLDKSKQLIKICRDLTPVQISKLMGISDKLAGLN CEEEECCHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCC AARFGDWQPKFTPENARQALLAFKGDVYTGLHAQDFSEDDFDFAQQHLRMLSGLYGVLRP HHHCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LDLMMPYRLEMGIKLDNAKGKDLYSFWGEQITKKLNEALEQQGDDVVVNLASDEYFKSVK HHHHCCHHEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCC PAKLHGELIKPVFLDEKNGKYKVISFYAKKARGLMSRFIIKNRLTQREQLLDFNLEGYAF CHHHHHHHHCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE DEANSQGNELVFKRPEQ CCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA