| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhbW [H]
Identifier: 157368745
GI number: 157368745
Start: 551145
End: 552170
Strand: Reverse
Name: yhbW [H]
Synonym: Spro_0498
Alternate gene names: 157368745
Gene position: 552170-551145 (Counterclockwise)
Preceding gene: 157368750
Following gene: 157368728
Centisome position: 10.13
GC content: 58.09
Gene sequence:
>1026_bases ATGGACGATATCATGACTGAAAAAACTACGGTGCCGGTTTCGGTACTGGATTTATCTCCCATTCCGCAAGGGGCCAAACC CCGTGATGCCTTTCACGCCTCTTTAGATTTAGCACAACATGCCGAAAAATGGGGCTATCAACGCTACTGGTTGGCAGAAC ATCACAATATGACCGGCATTGGCAGTGCGGCAACCTCGGTTTTGCTGGGCTATCTGGCCGCCGGTACCCAGAGTATCCGC CTCGGCTCCGGTGGCGTAATGCTGCCCAACCATGCGCCGCTGGTCATTGCCGAGCAGTTCGGTACGCTGGAGTCGCTGTA CCCTGGACGTATCGATCTGGGTCTGGGCCGCGCGCCCGGCACCGACCAACGCACCATGATGGCGTTGCGTCGTCATCTGT CCGGTGAAGTGGATAACTTCCCGCGCGACGTGCAGGAACTGCAACATTACTTTGGTGAGGTACAAGCGGGCCAGCCGGTG CAGGCAGTACCCGGCCAGGGGTTACACGTGCCGATCTGGCTGTTGGGCTCCAGCCTGTACAGCGCCCAGTTGGCGGCACA GCTTGGCCTGCCGTTTGCCTTCGCTTCCCACTTTGCACCAGAGATGCTGTTCCAGGCATTTAACCTGTACCGCGACAACT TCAAGCCTTCCGAACAATGCCAACGGCCACACGCCATGGTATGCGTCAACGTGGTGGCCGCCGACAGCGATGCCGATGCT CGTTTCCTGTTTACCTCTATGCAGCAGCAGTTTATCAATCTGCGCCGCGGCTCGCCGGGCCCACTGCCGGCACCGGTGGA CAATATCCACGCGCTGTGGACCGCCGGAGAACAATACGGCGTCGATCAGGCGCTGCGCATGTCTGTCATCGGCAATGAAA CTACCGTGCGTAATGGGCTGCAGACGCTGCTCAGCGAAACCGGCGCGGATGAAATCATGGTTAACGGCCAGATCTTTGAC CATCAGGCGCGCTTACATTCGTTTGAAATTGTCGCCGGGGTGAAAGGCGATTTGGTGAAGGGATAA
Upstream 100 bases:
>100_bases TTTATAACTATAAATTGGATTATGCTTTTAACACTAAAAGCACATTTTGCTTTGTAGTTTGCAGACCTCTGCAATCGCCC TTTAAGCGATCAACTCTTTG
Downstream 100 bases:
>100_bases ACTATTTGGGCGCCTTTACGGCGCCCTCATTTTATCAGCGCTGAATCAGGTAGCGGATGGTGGGACCATCCTGCTGGATA TCCAGTACCTTGTAGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MDDIMTEKTTVPVSVLDLSPIPQGAKPRDAFHASLDLAQHAEKWGYQRYWLAEHHNMTGIGSAATSVLLGYLAAGTQSIR LGSGGVMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDQRTMMALRRHLSGEVDNFPRDVQELQHYFGEVQAGQPV QAVPGQGLHVPIWLLGSSLYSAQLAAQLGLPFAFASHFAPEMLFQAFNLYRDNFKPSEQCQRPHAMVCVNVVAADSDADA RFLFTSMQQQFINLRRGSPGPLPAPVDNIHALWTAGEQYGVDQALRMSVIGNETTVRNGLQTLLSETGADEIMVNGQIFD HQARLHSFEIVAGVKGDLVKG
Sequences:
>Translated_341_residues MDDIMTEKTTVPVSVLDLSPIPQGAKPRDAFHASLDLAQHAEKWGYQRYWLAEHHNMTGIGSAATSVLLGYLAAGTQSIR LGSGGVMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDQRTMMALRRHLSGEVDNFPRDVQELQHYFGEVQAGQPV QAVPGQGLHVPIWLLGSSLYSAQLAAQLGLPFAFASHFAPEMLFQAFNLYRDNFKPSEQCQRPHAMVCVNVVAADSDADA RFLFTSMQQQFINLRRGSPGPLPAPVDNIHALWTAGEQYGVDQALRMSVIGNETTVRNGLQTLLSETGADEIMVNGQIFD HQARLHSFEIVAGVKGDLVKG >Mature_341_residues MDDIMTEKTTVPVSVLDLSPIPQGAKPRDAFHASLDLAQHAEKWGYQRYWLAEHHNMTGIGSAATSVLLGYLAAGTQSIR LGSGGVMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGTDQRTMMALRRHLSGEVDNFPRDVQELQHYFGEVQAGQPV QAVPGQGLHVPIWLLGSSLYSAQLAAQLGLPFAFASHFAPEMLFQAFNLYRDNFKPSEQCQRPHAMVCVNVVAADSDADA RFLFTSMQQQFINLRRGSPGPLPAPVDNIHALWTAGEQYGVDQALRMSVIGNETTVRNGLQTLLSETGADEIMVNGQIFD HQARLHSFEIVAGVKGDLVKG
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=335, Percent_Identity=69.2537313432836, Blast_Score=488, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 37151; Mature: 37151
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDIMTEKTTVPVSVLDLSPIPQGAKPRDAFHASLDLAQHAEKWGYQRYWLAEHHNMTGI CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC GSAATSVLLGYLAAGTQSIRLGSGGVMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPG HHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCEEEEHHHCCHHHCCCCCEEECCCCCCC TDQRTMMALRRHLSGEVDNFPRDVQELQHYFGEVQAGQPVQAVPGQGLHVPIWLLGSSLY CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCHHH SAQLAAQLGLPFAFASHFAPEMLFQAFNLYRDNFKPSEQCQRPHAMVCVNVVAADSDADA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCCH RFLFTSMQQQFINLRRGSPGPLPAPVDNIHALWTAGEQYGVDQALRMSVIGNETTVRNGL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEECCHHHCCCHHHHHHHCCCCHHHHHHH QTLLSETGADEIMVNGQIFDHQARLHSFEIVAGVKGDLVKG HHHHHHCCCCEEEECCEEECCHHHHHHEEEEECCCCCCCCC >Mature Secondary Structure MDDIMTEKTTVPVSVLDLSPIPQGAKPRDAFHASLDLAQHAEKWGYQRYWLAEHHNMTGI CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC GSAATSVLLGYLAAGTQSIRLGSGGVMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPG HHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCEEEEHHHCCHHHCCCCCEEECCCCCCC TDQRTMMALRRHLSGEVDNFPRDVQELQHYFGEVQAGQPVQAVPGQGLHVPIWLLGSSLY CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCHHH SAQLAAQLGLPFAFASHFAPEMLFQAFNLYRDNFKPSEQCQRPHAMVCVNVVAADSDADA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCCH RFLFTSMQQQFINLRRGSPGPLPAPVDNIHALWTAGEQYGVDQALRMSVIGNETTVRNGL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEECCHHHCCCHHHHHHHCCCCHHHHHHH QTLLSETGADEIMVNGQIFDHQARLHSFEIVAGVKGDLVKG HHHHHHCCCCEEEECCEEECCHHHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]