| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is mpl [H]
Identifier: 157368712
GI number: 157368712
Start: 517301
End: 518680
Strand: Direct
Name: mpl [H]
Synonym: Spro_0465
Alternate gene names: 157368712
Gene position: 517301-518680 (Clockwise)
Preceding gene: 157368710
Following gene: 157368716
Centisome position: 9.49
GC content: 58.19
Gene sequence:
>1380_bases ATGCGCATTCACATTCTTGGGATCTGTGGCACCTTTATGGGCGGGCTGGCGGTGCTGGCTCGTTCGCTAGGGCATGAGGT GACCGGCTCTGACGCTAATGTCTATCCGCCGATGAGCACGCTGTTGGAGAAAGAAGGGATCGCACTGATCCAGGGCTACG ATCCGGCTCAGTTGGATCCTGCACCGGATCTGGTGATCATCGGTAACGCCATGACGCGCGGTAATCCGTGTGTTGAAGCA GTACTGGAGCAGGGCATCCCTTACGTTTCCGGCCCGCAGTGGCTGCATGATTATGTGCTGCGCGATCGCTGGGTACTGGC CGTTGCCGGGACACACGGCAAGACCACCACCGCCGGCATGGCAACCTGGATCCTGGAAGCCTGCGGCTACCAGCCGGGCT TTGTTATCGGTGGCGTGCCGGGCAACTTTGACGTTTCTGCTCGCCTGGGGGGCAGCCCGTTCTTTGTCATCGAAGCCGAT GAATATGACTGCGCGTTCTTCGACAAGCGTTCCAAGTTTGTGCATTACAGCCCGCGTACGCTGATCCTGAACAATCTGGA GTTTGATCACGCCGATATCTTCGACGATCTGAAAGCGATCCAGAAACAGTTCCACCATCTGGTGCGTTTGGTGCCAGGCA AGGGCAAAATTATTTTGCCTGATAACGACAGCCACCTGAAACAGGTGATGGCGATGGGCTGCTGGAGCGAGCAGGAGCTG GTTGGGGAAGAAGGCGCATGGCGTGCACAGAAACTGACGCCGGACGCCAGCCATTATGCGGTTTTCCTTAATGGTGAGCA GGTGGGCGAAGTTAAGTGGTCGCTGGTCGGTGAACACAACATGCATAACGGTTTGATGGCCATTGCCGCCACGCGCCATG TGGGTGTGTTGCCTGAAGATGCCTGCCGCGCGCTCGGCGATTTTATCAATGCCCGCCGTCGTCTGGAGCTGCGTGGTGAA GCCAATGGCGTCACGGTATATGACGACTTTGCCCATCATCCAACGGCAATTCTGGCGACCCTGGCTGCGTTGCGTAGCAA GGTGGGTGGCACTGCCCGCATTCTGGCGGTGCTTGAGCCGCGCTCCAACACCATGAAAATGGGCATCAGCAAGAACGATC TGGCCCCGTCGCTGGGTCGTGCCGATGAAGTCTTCCTGTTCCAGCCGCACCATATCCCCTGGCAGGTGGCGGAAGTGGCG GAAGCCTGCGTACAGCCGGCCCACTGGAGCGCCGATCTGGATACGCTGGTGGATATGATCGTGAAAACGGCTCAGCCGGG CGACCATATTCTGGTGATGAGTAACGGCGGCTTTGGGGGTATTCACGATCGGCTGCTGGAGGCTTTGGCCAACAAACCCG ATCCGAAAGCCACCTATTGA
Upstream 100 bases:
>100_bases GTAGCCCAAAGATGAACGCTATTCATAGGCAAATCCATTTCTTCTGGACGATTCTGAGCGTTAGAATGTGCCAACATTCG ACGTACTCTATGAGAAAACT
Downstream 100 bases:
>100_bases TTTTGATGACAAAGTCGTCTTTGAACCCGAGATACTCGGGCCTAGCGCACCGAGGGGCCATTATGGGACACATCCATGTG TCCCACCCTGCGGGCCGACT
Product: UDP-N-acetylmuramate
Products: NA
Alternate protein names: Murein peptide ligase [H]
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MRIHILGICGTFMGGLAVLARSLGHEVTGSDANVYPPMSTLLEKEGIALIQGYDPAQLDPAPDLVIIGNAMTRGNPCVEA VLEQGIPYVSGPQWLHDYVLRDRWVLAVAGTHGKTTTAGMATWILEACGYQPGFVIGGVPGNFDVSARLGGSPFFVIEAD EYDCAFFDKRSKFVHYSPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRLVPGKGKIILPDNDSHLKQVMAMGCWSEQEL VGEEGAWRAQKLTPDASHYAVFLNGEQVGEVKWSLVGEHNMHNGLMAIAATRHVGVLPEDACRALGDFINARRRLELRGE ANGVTVYDDFAHHPTAILATLAALRSKVGGTARILAVLEPRSNTMKMGISKNDLAPSLGRADEVFLFQPHHIPWQVAEVA EACVQPAHWSADLDTLVDMIVKTAQPGDHILVMSNGGFGGIHDRLLEALANKPDPKATY
Sequences:
>Translated_459_residues MRIHILGICGTFMGGLAVLARSLGHEVTGSDANVYPPMSTLLEKEGIALIQGYDPAQLDPAPDLVIIGNAMTRGNPCVEA VLEQGIPYVSGPQWLHDYVLRDRWVLAVAGTHGKTTTAGMATWILEACGYQPGFVIGGVPGNFDVSARLGGSPFFVIEAD EYDCAFFDKRSKFVHYSPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRLVPGKGKIILPDNDSHLKQVMAMGCWSEQEL VGEEGAWRAQKLTPDASHYAVFLNGEQVGEVKWSLVGEHNMHNGLMAIAATRHVGVLPEDACRALGDFINARRRLELRGE ANGVTVYDDFAHHPTAILATLAALRSKVGGTARILAVLEPRSNTMKMGISKNDLAPSLGRADEVFLFQPHHIPWQVAEVA EACVQPAHWSADLDTLVDMIVKTAQPGDHILVMSNGGFGGIHDRLLEALANKPDPKATY >Mature_459_residues MRIHILGICGTFMGGLAVLARSLGHEVTGSDANVYPPMSTLLEKEGIALIQGYDPAQLDPAPDLVIIGNAMTRGNPCVEA VLEQGIPYVSGPQWLHDYVLRDRWVLAVAGTHGKTTTAGMATWILEACGYQPGFVIGGVPGNFDVSARLGGSPFFVIEAD EYDCAFFDKRSKFVHYSPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRLVPGKGKIILPDNDSHLKQVMAMGCWSEQEL VGEEGAWRAQKLTPDASHYAVFLNGEQVGEVKWSLVGEHNMHNGLMAIAATRHVGVLPEDACRALGDFINARRRLELRGE ANGVTVYDDFAHHPTAILATLAALRSKVGGTARILAVLEPRSNTMKMGISKNDLAPSLGRADEVFLFQPHHIPWQVAEVA EACVQPAHWSADLDTLVDMIVKTAQPGDHILVMSNGGFGGIHDRLLEALANKPDPKATY
Specific function: Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramic acid [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1790680, Length=454, Percent_Identity=86.5638766519824, Blast_Score=823, Evalue=0.0, Organism=Escherichia coli, GI1786279, Length=286, Percent_Identity=30.0699300699301, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005757 - InterPro: IPR016040 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: 6.3.2.- [C]
Molecular weight: Translated: 49998; Mature: 49998
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIHILGICGTFMGGLAVLARSLGHEVTGSDANVYPPMSTLLEKEGIALIQGYDPAQLDP CEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCC APDLVIIGNAMTRGNPCVEAVLEQGIPYVSGPQWLHDYVLRDRWVLAVAGTHGKTTTAGM CCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHH ATWILEACGYQPGFVIGGVPGNFDVSARLGGSPFFVIEADEYDCAFFDKRSKFVHYSPRT HHHHHHHHCCCCCEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEECCCCCEEEECCCE LILNNLEFDHADIFDDLKAIQKQFHHLVRLVPGKGKIILPDNDSHLKQVMAMGCWSEQEL EEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCHHHHHHHHHHCCCCHHHH VGEEGAWRAQKLTPDASHYAVFLNGEQVGEVKWSLVGEHNMHNGLMAIAATRHVGVLPED CCCCCCCCHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHH ACRALGDFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRSKVGGTARILAVLEP HHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC RSNTMKMGISKNDLAPSLGRADEVFLFQPHHIPWQVAEVAEACVQPAHWSADLDTLVDMI CCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH VKTAQPGDHILVMSNGGFGGIHDRLLEALANKPDPKATY HHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRIHILGICGTFMGGLAVLARSLGHEVTGSDANVYPPMSTLLEKEGIALIQGYDPAQLDP CEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCC APDLVIIGNAMTRGNPCVEAVLEQGIPYVSGPQWLHDYVLRDRWVLAVAGTHGKTTTAGM CCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHH ATWILEACGYQPGFVIGGVPGNFDVSARLGGSPFFVIEADEYDCAFFDKRSKFVHYSPRT HHHHHHHHCCCCCEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEECCCCCEEEECCCE LILNNLEFDHADIFDDLKAIQKQFHHLVRLVPGKGKIILPDNDSHLKQVMAMGCWSEQEL EEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCHHHHHHHHHHCCCCHHHH VGEEGAWRAQKLTPDASHYAVFLNGEQVGEVKWSLVGEHNMHNGLMAIAATRHVGVLPED CCCCCCCCHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHH ACRALGDFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRSKVGGTARILAVLEP HHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC RSNTMKMGISKNDLAPSLGRADEVFLFQPHHIPWQVAEVAEACVQPAHWSADLDTLVDMI CCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH VKTAQPGDHILVMSNGGFGGIHDRLLEALANKPDPKATY HHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 2843822; 7984428; 8808921 [H]