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The map label for this gene is ytfM [H]

Identifier: 157368706

GI number: 157368706

Start: 507797

End: 509533

Strand: Direct

Name: ytfM [H]

Synonym: Spro_0459

Alternate gene names: 157368706

Gene position: 507797-509533 (Clockwise)

Preceding gene: 157368703

Following gene: 157368707

Centisome position: 9.32

GC content: 57.05

Gene sequence:

>1737_bases
GTGCCACGATACCGTGCCCTGTGCTTTGTGTGTGCGCTGCTCGCCACGCCTGCGGCCTATTCGGCGAATGTGCGGCTGCA
GGTTGAAGGACTTAGTGGGGAATTGGAAAAAAACGTCCGGGTGCGTTTGTCGTCTATCACGCCGGAGGAGGTCAGTACGG
ATGGCCGTTTTCGCGCACGTGTGGACGAAGCCGTCCGTCAGGGGCTGAGAGCACTTGGCTATTATCAGCCCACCATCGAC
TTTACGCTGGATGACCGGCCAGGGCTGGCTCGTCCGGTGCTGCACGCCAAGGTTAATCCGGGCGAGCCGGTGCGGATTGC
CGGCGCCAATATCGTGCTGGAAGGCGGCGCGAAAACCGATGACGACTATCTGGCGTTAGTCAAAAAAGGCAAGCCGACGA
TAGGCGAGATCCTCAATCACGGCAAATACGACAGTTTTAAAGGTTCGCTGACCGGCCTGGCACTGCGTAAAGGCTATTTC
GATGCCGATTTGACCAAGAGCCAGCTCGGCGTGGCCGAAGAGCTGCACAAGGCCTATTGGGACATCGACTTCAACAGCGG
GCAGCGTTATCGCTTTGGCCAGGTGAAGTTTACCGGCTCGCAAATTCGTGAAGACTATCTGCAAAATCTGGTGCCCTTTC
ATCAGGGGGATTATTACAGTTCGGAAGATCTGGCCGAACTGAACCGCCGTTTATCCGCCACTAACTGGTTTAACTCGGTG
GTGGTGTCCCCTGATTTCAAAGATGCCAAAGAGAACAAGATTTTGCCGTTAGATGCGTTGGTATCACCGCGCACGCGTAA
CACCATCGAAACCGGGGTCGGTTATTCCACCGACGTCGGTCCCCGGATCAAAGGCACCTGGAAAAAACCCTGGCTTAACG
ACCGAGGTCACAGCCTGGAAACCAGCGCCAGCGTTTCGGCCCCGGAACAGCAGCTCGATTTGACCTATAAAATCCCGTTA
TTGAAGAATCCACTGGAGCAGTACTACCTGCTGCAGGGCGGTTTCAAGAACGTCGATCTCAACGATACCAAGTCCGTCAC
TTCAAAAGCGGTGGTTTCCCGCAACTGGGATCTTTCCAGCGGCTGGCAGCGAGCATTGAACCTGACCTGGCGTCTTGACC
ACTTTACTCAGGGTAACGTCACCAACACCACCATGCTGCTGTATCCCGGCGTTAGCGTTAACCGCACCCGTTCGCGCGGC
GGCCTGATGCCCACCTGGGGGGACAGCCAGCGTTATTCTATTGATGTGTCCGACAGCACCTGGGGATCAGACGTGGACTT
CGCGCTGATGCAGGCGCAGAACGTCTGGATCCGCACCCTGGCCGACAAGCACCGTTTTGTCGCGCGTGGGCAGGTGGGCT
GGATTGAAACCAACGACTTTGAGAGAGTGCCGCCAGACCTGCGATTCTTCGCCGGTGGCGATCGCAGCATTCGTGGTTAC
AAGTACAAGGGCATTTCACCCCGCGACGACGACGGTAAGCTGACCGGTGCATCCAAAATGCTGACCGGCTCGCTGGAGTA
TCAATACAACGTGACCGGCAAATGGTGGGGCGCGGTGTTTGTCGATTCAGGCGAAGCGGTGAACGATATCAAGCAGAGCG
ACTTTAAGACCGGTGCCGGCTTCGGCGTGCGCTGGCAGTCACCGGTTGGCCCGGTGAAGCTGGATATCGCCGCCCCGGTT
GGGGATAAGGACACCCACGGGGTGCAGTTCTATATTGGTTTGGGGCCTGAACTATGA

Upstream 100 bases:

>100_bases
GAAAAATGCTGAAAAGGGCCGCCGTCCTGATAGCGCGGAGTAGGCCCTGGCCCCAGAGCGAGTGTTATTACAGGAAAGTA
AAATAAATTAAGGAGAACAC

Downstream 100 bases:

>100_bases
GCCTGATAAAAAAGATTTGCCTGGGTTTCCTGATTGTCCTGCTATTGCTGATCGGCGGCGTTGCATACCTGCTCGGGACC
ACCAGTGGTTTGCATTTGGT

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MPRYRALCFVCALLATPAAYSANVRLQVEGLSGELEKNVRVRLSSITPEEVSTDGRFRARVDEAVRQGLRALGYYQPTID
FTLDDRPGLARPVLHAKVNPGEPVRIAGANIVLEGGAKTDDDYLALVKKGKPTIGEILNHGKYDSFKGSLTGLALRKGYF
DADLTKSQLGVAEELHKAYWDIDFNSGQRYRFGQVKFTGSQIREDYLQNLVPFHQGDYYSSEDLAELNRRLSATNWFNSV
VVSPDFKDAKENKILPLDALVSPRTRNTIETGVGYSTDVGPRIKGTWKKPWLNDRGHSLETSASVSAPEQQLDLTYKIPL
LKNPLEQYYLLQGGFKNVDLNDTKSVTSKAVVSRNWDLSSGWQRALNLTWRLDHFTQGNVTNTTMLLYPGVSVNRTRSRG
GLMPTWGDSQRYSIDVSDSTWGSDVDFALMQAQNVWIRTLADKHRFVARGQVGWIETNDFERVPPDLRFFAGGDRSIRGY
KYKGISPRDDDGKLTGASKMLTGSLEYQYNVTGKWWGAVFVDSGEAVNDIKQSDFKTGAGFGVRWQSPVGPVKLDIAAPV
GDKDTHGVQFYIGLGPEL

Sequences:

>Translated_578_residues
MPRYRALCFVCALLATPAAYSANVRLQVEGLSGELEKNVRVRLSSITPEEVSTDGRFRARVDEAVRQGLRALGYYQPTID
FTLDDRPGLARPVLHAKVNPGEPVRIAGANIVLEGGAKTDDDYLALVKKGKPTIGEILNHGKYDSFKGSLTGLALRKGYF
DADLTKSQLGVAEELHKAYWDIDFNSGQRYRFGQVKFTGSQIREDYLQNLVPFHQGDYYSSEDLAELNRRLSATNWFNSV
VVSPDFKDAKENKILPLDALVSPRTRNTIETGVGYSTDVGPRIKGTWKKPWLNDRGHSLETSASVSAPEQQLDLTYKIPL
LKNPLEQYYLLQGGFKNVDLNDTKSVTSKAVVSRNWDLSSGWQRALNLTWRLDHFTQGNVTNTTMLLYPGVSVNRTRSRG
GLMPTWGDSQRYSIDVSDSTWGSDVDFALMQAQNVWIRTLADKHRFVARGQVGWIETNDFERVPPDLRFFAGGDRSIRGY
KYKGISPRDDDGKLTGASKMLTGSLEYQYNVTGKWWGAVFVDSGEAVNDIKQSDFKTGAGFGVRWQSPVGPVKLDIAAPV
GDKDTHGVQFYIGLGPEL
>Mature_577_residues
PRYRALCFVCALLATPAAYSANVRLQVEGLSGELEKNVRVRLSSITPEEVSTDGRFRARVDEAVRQGLRALGYYQPTIDF
TLDDRPGLARPVLHAKVNPGEPVRIAGANIVLEGGAKTDDDYLALVKKGKPTIGEILNHGKYDSFKGSLTGLALRKGYFD
ADLTKSQLGVAEELHKAYWDIDFNSGQRYRFGQVKFTGSQIREDYLQNLVPFHQGDYYSSEDLAELNRRLSATNWFNSVV
VSPDFKDAKENKILPLDALVSPRTRNTIETGVGYSTDVGPRIKGTWKKPWLNDRGHSLETSASVSAPEQQLDLTYKIPLL
KNPLEQYYLLQGGFKNVDLNDTKSVTSKAVVSRNWDLSSGWQRALNLTWRLDHFTQGNVTNTTMLLYPGVSVNRTRSRGG
LMPTWGDSQRYSIDVSDSTWGSDVDFALMQAQNVWIRTLADKHRFVARGQVGWIETNDFERVPPDLRFFAGGDRSIRGYK
YKGISPRDDDGKLTGASKMLTGSLEYQYNVTGKWWGAVFVDSGEAVNDIKQSDFKTGAGFGVRWQSPVGPVKLDIAAPVG
DKDTHGVQFYIGLGPEL

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=578, Percent_Identity=71.4532871972318, Blast_Score=872, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 64403; Mature: 64272

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYRALCFVCALLATPAAYSANVRLQVEGLSGELEKNVRVRLSSITPEEVSTDGRFRAR
CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCHHHHCCCCCHHHH
VDEAVRQGLRALGYYQPTIDFTLDDRPGLARPVLHAKVNPGEPVRIAGANIVLEGGAKTD
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEECCEEEEECCCCCC
DDYLALVKKGKPTIGEILNHGKYDSFKGSLTGLALRKGYFDADLTKSQLGVAEELHKAYW
CCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHE
DIDFNSGQRYRFGQVKFTGSQIREDYLQNLVPFHQGDYYSSEDLAELNRRLSATNWFNSV
EEECCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
VVSPDFKDAKENKILPLDALVSPRTRNTIETGVGYSTDVGPRIKGTWKKPWLNDRGHSLE
EECCCCCCCCCCCEEEHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
TSASVSAPEQQLDLTYKIPLLKNPLEQYYLLQGGFKNVDLNDTKSVTSKAVVSRNWDLSS
CCCCCCCCHHHCCEEEECCHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
GWQRALNLTWRLDHFTQGNVTNTTMLLYPGVSVNRTRSRGGLMPTWGDSQRYSIDVSDST
CHHHHEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
WGSDVDFALMQAQNVWIRTLADKHRFVARGQVGWIETNDFERVPPDLRFFAGGDRSIRGY
CCCCCCEEEHHHCCHHEEHHHHHHHEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCCE
KYKGISPRDDDGKLTGASKMLTGSLEYQYNVTGKWWGAVFVDSGEAVNDIKQSDFKTGAG
EECCCCCCCCCCCEECCCCEEEECEEEEEECCEEEEEEEEEECCCHHHHHHHHCCCCCCC
FGVRWQSPVGPVKLDIAAPVGDKDTHGVQFYIGLGPEL
CCEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
PRYRALCFVCALLATPAAYSANVRLQVEGLSGELEKNVRVRLSSITPEEVSTDGRFRAR
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCHHHHCCCCCHHHH
VDEAVRQGLRALGYYQPTIDFTLDDRPGLARPVLHAKVNPGEPVRIAGANIVLEGGAKTD
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEECCEEEEECCCCCC
DDYLALVKKGKPTIGEILNHGKYDSFKGSLTGLALRKGYFDADLTKSQLGVAEELHKAYW
CCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHE
DIDFNSGQRYRFGQVKFTGSQIREDYLQNLVPFHQGDYYSSEDLAELNRRLSATNWFNSV
EEECCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
VVSPDFKDAKENKILPLDALVSPRTRNTIETGVGYSTDVGPRIKGTWKKPWLNDRGHSLE
EECCCCCCCCCCCEEEHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
TSASVSAPEQQLDLTYKIPLLKNPLEQYYLLQGGFKNVDLNDTKSVTSKAVVSRNWDLSS
CCCCCCCCHHHCCEEEECCHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
GWQRALNLTWRLDHFTQGNVTNTTMLLYPGVSVNRTRSRGGLMPTWGDSQRYSIDVSDST
CHHHHEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
WGSDVDFALMQAQNVWIRTLADKHRFVARGQVGWIETNDFERVPPDLRFFAGGDRSIRGY
CCCCCCEEEHHHCCHHEEHHHHHHHEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCCE
KYKGISPRDDDGKLTGASKMLTGSLEYQYNVTGKWWGAVFVDSGEAVNDIKQSDFKTGAG
EECCCCCCCCCCCEECCCCEEEECEEEEEECCEEEEEEEEEECCCHHHHHHHHCCCCCCC
FGVRWQSPVGPVKLDIAAPVGDKDTHGVQFYIGLGPEL
CCEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]