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The map label for this gene is traC [H]

Identifier: 157368642

GI number: 157368642

Start: 443174

End: 444208

Strand: Direct

Name: traC [H]

Synonym: Spro_0395

Alternate gene names: 157368642

Gene position: 443174-444208 (Clockwise)

Preceding gene: 157368641

Following gene: 157368643

Centisome position: 8.13

GC content: 58.84

Gene sequence:

>1035_bases
ATGCGCCTTTTTTACGAGGATCACTCCATGAAAAAAACATCATCACGTCAGCCGGCAAAAGCCCGTCGAGAACGTCCCGA
CTTGTATCAGCAGGTGACGGACAAAATCATTGCCGCCATCGAGATGGGAACGTTGCCCTGGCGCAAGCCCTGGCGGACCG
ACAAGGCCCGCGGCGCGTCGACGGCCATCATGCCGCAGAACGGCACGACCGGTTACCACTACAGTGGCGTGAATGTGCTG
CTGTTGTGGATGGCCGCGGACGAAAGGGGCTTTCACTCCAATCGCTGGCTCACCTACAAGCAGGCGGAAGCCGTCGGTGG
CCATGTGCGTGCCGGTGAAACCGCGACCCTGGCCGTGGTATTCAAACCCTGGGACAAGCAGGTGGAGGATGCTGACGGCC
GGCAGCTGTTTGACGAGGACGGGAACCCACTGAAAACGCGAATACCCATGTTGAAGCCGCTGTACCTGTTTAACGTTGCC
CAATGCGACAACCTCCCGGAAACCGTTGTCGGCATTACGCCGGCAGAGGAGCTGGACGAGGATAGCGCGTTGGTCGATGC
GAAAACGCAGGCTCAGGTCAACACCCTCGTTGATGCCTGTGGTGTTCGGTTCGAGCAGGTTTACCAGGACAGGGCATTTT
ACTCCCCGATCCGCGACCAGATTGTCTTGCCACAGGTTCGGCAATTTCGAACCGAGGCGGATTACTGGTCGACGTTATTG
CATGAACTGGTGCACAGCACCGGTCATGCAACACGGCTCAACCGGGAGGGGATCACGTCTTCTTCCCGGGCGTTCGGTGA
CCCGGTGTACGCGTTCGAAGAACTGGTGGCGGAGCTGGGCAGTGCCTTTATGTGCGCGCAGCTTGGCGTCTTTGGCGACG
TTCAGCACGACAGCTACCTCGAGCATTGGCTCAAGGTATTACGTGAGGATAAGCGCGCGCTGTTTCGGGCGGCCAAACAG
GCCCGTGAGGCTTCAGAGTTTCTGCTGAAGCCCCTGGTGGTACCGGTGATAACAGATCCTGCCGTTGCGGCATGA

Upstream 100 bases:

>100_bases
CAGCGTGTTGACACCGTTAATCCGAAAGGGGCGCTGCGTTACCCCGCTTTCTAACCATTTTTCTGTCCCCTGGGGCGTAT
TCTTCGCCACCAGGGGAGGA

Downstream 100 bases:

>100_bases
GGAGTTAGGTGATGACGATTGAACAGTGCTATTGGCAGACCATTGCCGGCAGGCTACTGGCCAAATACTTTGGTCTGACG
TTAAACGATACCGATTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Replication primase [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRLFYEDHSMKKTSSRQPAKARRERPDLYQQVTDKIIAAIEMGTLPWRKPWRTDKARGASTAIMPQNGTTGYHYSGVNVL
LLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQVEDADGRQLFDEDGNPLKTRIPMLKPLYLFNVA
QCDNLPETVVGITPAEELDEDSALVDAKTQAQVNTLVDACGVRFEQVYQDRAFYSPIRDQIVLPQVRQFRTEADYWSTLL
HELVHSTGHATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYLEHWLKVLREDKRALFRAAKQ
AREASEFLLKPLVVPVITDPAVAA

Sequences:

>Translated_344_residues
MRLFYEDHSMKKTSSRQPAKARRERPDLYQQVTDKIIAAIEMGTLPWRKPWRTDKARGASTAIMPQNGTTGYHYSGVNVL
LLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQVEDADGRQLFDEDGNPLKTRIPMLKPLYLFNVA
QCDNLPETVVGITPAEELDEDSALVDAKTQAQVNTLVDACGVRFEQVYQDRAFYSPIRDQIVLPQVRQFRTEADYWSTLL
HELVHSTGHATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYLEHWLKVLREDKRALFRAAKQ
AREASEFLLKPLVVPVITDPAVAA
>Mature_344_residues
MRLFYEDHSMKKTSSRQPAKARRERPDLYQQVTDKIIAAIEMGTLPWRKPWRTDKARGASTAIMPQNGTTGYHYSGVNVL
LLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQVEDADGRQLFDEDGNPLKTRIPMLKPLYLFNVA
QCDNLPETVVGITPAEELDEDSALVDAKTQAQVNTLVDACGVRFEQVYQDRAFYSPIRDQIVLPQVRQFRTEADYWSTLL
HELVHSTGHATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYLEHWLKVLREDKRALFRAAKQ
AREASEFLLKPLVVPVITDPAVAA

Specific function: Required for autonomous replication in E.coli. Transferred into the recipient cell during bacterial conjugation. Catalyzes the synthesis of short oligoribonucleotide primers with CpA or pCpA at their 5'-termini on a single stranded template DNA [H]

COG id: COG4227

COG function: function code L; Antirestriction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013610
- InterPro:   IPR006171 [H]

Pfam domain/function: PF08401 DUF1738; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 38840; Mature: 38840

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFYEDHSMKKTSSRQPAKARRERPDLYQQVTDKIIAAIEMGTLPWRKPWRTDKARGAS
CEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TAIMPQNGTTGYHYSGVNVLLLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVV
EEEECCCCCCCEEECCCEEEEEEEECCCCCCCCCCEEEEHHHHHCCCCEECCCCEEEEEE
FKPWDKQVEDADGRQLFDEDGNPLKTRIPMLKPLYLFNVAQCDNLPETVVGITPAEELDE
ECCCCCCCCCCCCCCHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHEECCCHHHCCC
DSALVDAKTQAQVNTLVDACGVRFEQVYQDRAFYSPIRDQIVLPQVRQFRTEADYWSTLL
CCHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
HELVHSTGHATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYL
HHHHHCCCCCEECCCCCCCCCCHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHH
EHWLKVLREDKRALFRAAKQAREASEFLLKPLVVPVITDPAVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MRLFYEDHSMKKTSSRQPAKARRERPDLYQQVTDKIIAAIEMGTLPWRKPWRTDKARGAS
CEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TAIMPQNGTTGYHYSGVNVLLLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVV
EEEECCCCCCCEEECCCEEEEEEEECCCCCCCCCCEEEEHHHHHCCCCEECCCCEEEEEE
FKPWDKQVEDADGRQLFDEDGNPLKTRIPMLKPLYLFNVAQCDNLPETVVGITPAEELDE
ECCCCCCCCCCCCCCHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHEECCCHHHCCC
DSALVDAKTQAQVNTLVDACGVRFEQVYQDRAFYSPIRDQIVLPQVRQFRTEADYWSTLL
CCHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
HELVHSTGHATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYL
HHHHHCCCCCEECCCCCCCCCCHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHH
EHWLKVLREDKRALFRAAKQAREASEFLLKPLVVPVITDPAVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1818755 [H]