| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368633
Identifier: 157368633
GI number: 157368633
Start: 433817
End: 434737
Strand: Direct
Name: 157368633
Synonym: Spro_0386
Alternate gene names: NA
Gene position: 433817-434737 (Clockwise)
Preceding gene: 157368631
Following gene: 157368636
Centisome position: 7.96
GC content: 53.64
Gene sequence:
>921_bases ATGCTTTACCTCGATAATGGACCCGTGGCTAAAAGTCGGGTTTTCCAGGACGTCATGCTGGCGCTGGGGGTTAACTGGCT GACTCATCTGCCTGCCGGAAAGGACGGTGAGCGTGTAACCGCTCGTTCTAAAGGCAAGGTGGAACGTCCCTTTCGAACCG TAAAGGAAGCGCACGAAACCCTGTATCATTTTCACAAACCGGAAACCGAGCAGCAGGCCAATGCCTGGTTATTGCGTTAC TTGCTTCACTATAACGAACAACCACACCGTTCGCAGGTTCATTTTCGCAAAGAGGACTGGCTGACCAATCTGCCTCCCGA GGGGATACGCGATATGTGCAATTGGGAGCAGTTTTGTCGCTTTGCCCGGGAGCCTGAGCGCCGAAAAGTGGGGATCGATG CCCGTATCACGGTCGAAGGCACGGCGTATGAGGTTGATCCGGATCTGGCCGGGGAAACTGTGTTGCTGCTCTGGGGGCTG TTTGACAGTGAGTTGCATGTTGAATTTGAAGGAAAGAGAACCGGGCCTTATTACCCAGTCTCGGGCCCGGTTCCCCTGAA TCGCTATCGGGCATTCAGAAAAGGGGCGATCAGTCAGCGGGCAGAACGCATCCGTACCCTGGCCCAGCAACTCAGTTTAC CCATCGCTGCGCTGACAGGCGAAAACATCGCGTTAATTTCACAATCAGAAACCCACGACATTCCCAGGCAGTCATTTCCA ACTACGGCGGAAGAATGCTATGCCACAACCATTATGGCCAAACTGGCGATCGCAAACGAGCTGGCTACACCGTTGGCAAA ACTGACGTCTTCCGACAGGCAGTTCATCGAGCAATTATTGGGGGAAACACTGATACGCAGGATTGTGCTGAACCGCGTAC TGAATAGACCCGGATTTCCTAGACGGTTCCGTGCCTCATGA
Upstream 100 bases:
>100_bases CTGTGTTTACGGCGAGGATGCGGGGTCGGCACTGCGATTCCTCTACGCAGCCATGGCACCCAAGACCGAGTCTGCGCTTG CGTTGATGGGGCGACCCAAA
Downstream 100 bases:
>100_bases ACCAGGCACTTTCATAAACTGCAGGGGGTTGATCCTCACAGGCACTGTGGCGGCGTTTAGCATTATAAAACATCTCTACA TAATCGAAGATATCCGCCTT
Product: phage integrase family site specific recombinase
Products: NA
Alternate protein names: Phage Integrase Family Site Specific Recombinase; Integrase Catalytic Region; Transposase; Integrase; Site-Specific Recombinase Phage Integrase Family; Integrase Catalytic Subunit
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLYLDNGPVAKSRVFQDVMLALGVNWLTHLPAGKDGERVTARSKGKVERPFRTVKEAHETLYHFHKPETEQQANAWLLRY LLHYNEQPHRSQVHFRKEDWLTNLPPEGIRDMCNWEQFCRFAREPERRKVGIDARITVEGTAYEVDPDLAGETVLLLWGL FDSELHVEFEGKRTGPYYPVSGPVPLNRYRAFRKGAISQRAERIRTLAQQLSLPIAALTGENIALISQSETHDIPRQSFP TTAEECYATTIMAKLAIANELATPLAKLTSSDRQFIEQLLGETLIRRIVLNRVLNRPGFPRRFRAS
Sequences:
>Translated_306_residues MLYLDNGPVAKSRVFQDVMLALGVNWLTHLPAGKDGERVTARSKGKVERPFRTVKEAHETLYHFHKPETEQQANAWLLRY LLHYNEQPHRSQVHFRKEDWLTNLPPEGIRDMCNWEQFCRFAREPERRKVGIDARITVEGTAYEVDPDLAGETVLLLWGL FDSELHVEFEGKRTGPYYPVSGPVPLNRYRAFRKGAISQRAERIRTLAQQLSLPIAALTGENIALISQSETHDIPRQSFP TTAEECYATTIMAKLAIANELATPLAKLTSSDRQFIEQLLGETLIRRIVLNRVLNRPGFPRRFRAS >Mature_306_residues MLYLDNGPVAKSRVFQDVMLALGVNWLTHLPAGKDGERVTARSKGKVERPFRTVKEAHETLYHFHKPETEQQANAWLLRY LLHYNEQPHRSQVHFRKEDWLTNLPPEGIRDMCNWEQFCRFAREPERRKVGIDARITVEGTAYEVDPDLAGETVLLLWGL FDSELHVEFEGKRTGPYYPVSGPVPLNRYRAFRKGAISQRAERIRTLAQQLSLPIAALTGENIALISQSETHDIPRQSFP TTAEECYATTIMAKLAIANELATPLAKLTSSDRQFIEQLLGETLIRRIVLNRVLNRPGFPRRFRAS
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35102; Mature: 35102
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLDNGPVAKSRVFQDVMLALGVNWLTHLPAGKDGERVTARSKGKVERPFRTVKEAHET CEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHH LYHFHKPETEQQANAWLLRYLLHYNEQPHRSQVHFRKEDWLTNLPPEGIRDMCNWEQFCR HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCCHHHHHHHCCHHHHHH FAREPERRKVGIDARITVEGTAYEVDPDLAGETVLLLWGLFDSELHVEFEGKRTGPYYPV HHCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC SGPVPLNRYRAFRKGAISQRAERIRTLAQQLSLPIAALTGENIALISQSETHDIPRQSFP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCC TTAEECYATTIMAKLAIANELATPLAKLTSSDRQFIEQLLGETLIRRIVLNRVLNRPGFP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RRFRAS CCCCCC >Mature Secondary Structure MLYLDNGPVAKSRVFQDVMLALGVNWLTHLPAGKDGERVTARSKGKVERPFRTVKEAHET CEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHH LYHFHKPETEQQANAWLLRYLLHYNEQPHRSQVHFRKEDWLTNLPPEGIRDMCNWEQFCR HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCCHHHHHHHCCHHHHHH FAREPERRKVGIDARITVEGTAYEVDPDLAGETVLLLWGLFDSELHVEFEGKRTGPYYPV HHCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC SGPVPLNRYRAFRKGAISQRAERIRTLAQQLSLPIAALTGENIALISQSETHDIPRQSFP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCC TTAEECYATTIMAKLAIANELATPLAKLTSSDRQFIEQLLGETLIRRIVLNRVLNRPGFP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RRFRAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA