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The map label for this gene is ymbA [H]

Identifier: 157368614

GI number: 157368614

Start: 416719

End: 417267

Strand: Direct

Name: ymbA [H]

Synonym: Spro_0367

Alternate gene names: 157368614

Gene position: 416719-417267 (Clockwise)

Preceding gene: 157368613

Following gene: 157368615

Centisome position: 7.65

GC content: 58.47

Gene sequence:

>549_bases
ATGATGAAATGGCTCCCGGTAGCCCTGGCGCTGTTGCTCAGCGCCTGTAGCAACACCCCCCAAAAAACCTACTATCAATT
GCCGGCGTTGGGCACGCCAGCTCAGGTGAACAGCGGCGCGTCAACGCGCCAACTGTGGTTAGAGCATGTTTTCGTGGCCG
ATTATCTCATGCAAAATGGCGTGGTTTATCAGACTAACGGCGTACAGTACGCCATCGCCCAAAACAACCTGTGGGCCAGC
CCGCTCGACCAGCAGCTGCAGCAGACGCTGGTCACCAACCTGAGCAGCGCGCTGCCGGGTTGGGTGGTCTCCTCCCAGCC
GATGAGCAGCGATCAGGATGTGCTCAACGTCACCATCAGCGGTTTCCACGGCCGCTTTGACGGCAAGGCTGTCATCCGCG
GCGAGTGGGTGCTGAATCACCAGGGCCGCCTTACCAAACGGCCGTTCAACCTGGAGTTGAAGCAGAGCGAAGACGGCTAT
GACGCACTGGTGCGTACCCTGGCAGAAGGATGGCAGAAGGAAGCGCAATCAATAGCCTTTCAGTTATAG

Upstream 100 bases:

>100_bases
GTGAACTGCAGCCGGTGCTGCACACCCTGAATGAAAAGAGCAACGCGCTGGTATTTGAAGCCGCCGCCAGCAATGACCCT
CAGCCTAAGAAGGCCAACAA

Downstream 100 bases:

>100_bases
ATAATGGGCTTTGTTTTTCTTGGCGGAACATTAAAAAACATTGTGACAAACCAGAGTTAATACAATGCTCCCACCTTGAA
ACATACGGCTTCACATGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MMKWLPVALALLLSACSNTPQKTYYQLPALGTPAQVNSGASTRQLWLEHVFVADYLMQNGVVYQTNGVQYAIAQNNLWAS
PLDQQLQQTLVTNLSSALPGWVVSSQPMSSDQDVLNVTISGFHGRFDGKAVIRGEWVLNHQGRLTKRPFNLELKQSEDGY
DALVRTLAEGWQKEAQSIAFQL

Sequences:

>Translated_182_residues
MMKWLPVALALLLSACSNTPQKTYYQLPALGTPAQVNSGASTRQLWLEHVFVADYLMQNGVVYQTNGVQYAIAQNNLWAS
PLDQQLQQTLVTNLSSALPGWVVSSQPMSSDQDVLNVTISGFHGRFDGKAVIRGEWVLNHQGRLTKRPFNLELKQSEDGY
DALVRTLAEGWQKEAQSIAFQL
>Mature_182_residues
MMKWLPVALALLLSACSNTPQKTYYQLPALGTPAQVNSGASTRQLWLEHVFVADYLMQNGVVYQTNGVQYAIAQNNLWAS
PLDQQLQQTLVTNLSSALPGWVVSSQPMSSDQDVLNVTISGFHGRFDGKAVIRGEWVLNHQGRLTKRPFNLELKQSEDGY
DALVRTLAEGWQKEAQSIAFQL

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693109, Length=183, Percent_Identity=57.3770491803279, Blast_Score=215, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005586 [H]

Pfam domain/function: PF03886 DUF330 [H]

EC number: NA

Molecular weight: Translated: 20236; Mature: 20236

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKWLPVALALLLSACSNTPQKTYYQLPALGTPAQVNSGASTRQLWLEHVFVADYLMQNG
CCCHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
VVYQTNGVQYAIAQNNLWASPLDQQLQQTLVTNLSSALPGWVVSSQPMSSDQDVLNVTIS
EEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEE
GFHGRFDGKAVIRGEWVLNHQGRLTKRPFNLELKQSEDGYDALVRTLAEGWQKEAQSIAF
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
QL
CC
>Mature Secondary Structure
MMKWLPVALALLLSACSNTPQKTYYQLPALGTPAQVNSGASTRQLWLEHVFVADYLMQNG
CCCHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
VVYQTNGVQYAIAQNNLWASPLDQQLQQTLVTNLSSALPGWVVSSQPMSSDQDVLNVTIS
EEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEE
GFHGRFDGKAVIRGEWVLNHQGRLTKRPFNLELKQSEDGYDALVRTLAEGWQKEAQSIAF
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
QL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]