| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368569
Identifier: 157368569
GI number: 157368569
Start: 373757
End: 374401
Strand: Direct
Name: 157368569
Synonym: Spro_0320
Alternate gene names: NA
Gene position: 373757-374401 (Clockwise)
Preceding gene: 157368566
Following gene: 157368570
Centisome position: 6.86
GC content: 59.07
Gene sequence:
>645_bases ATGAAAAAAACAATTCTCGTCTCTTCCCTGGCAGCACTCATGCTGACCGGGTGCGTTACTCAGCAGCCTCTGCAGCAGCG TGATATTTCCCCTGTTACGCCGTCTGTCACCGTCAATCGCAATGTTCAGCCGGTTAGCCCGGATGCCTACGGGCAGGTGC CTGAGGTAGTGCGCTACGACCGTTATTTATTGGTCAGCACTGACCCGGCGGCCGTTCAGCGTGATCCTCTCTCGCAAGTC ATCGATATCCGTATTCCGGCGTCAGTAAAACCGACGGTTGCTGATGCGTTGCGCTATGCGCTGCGCCAGTCGGGCTATTC CCTGTGCGCGACCGGACCGGCAAACGGCGTGCTATACCGCCAGGCGTTGCCGGCGGTGCAGTACCAACTGGGGCCGATGC GTTTGCGTACTGCCCTGCAGGTACTGGCAGGTCCCGCGTGGCAGCTCGAGGTAGACGACGTGCAACGTGTTGTCTGCCAC AGCCTGCGTGACGGGTATCAGTTGCCGGCGACACAGCTACCGCCGGTGATGGAGGTACCGGGCAAGGCGATTTTAGTACC GGTTTCAGCACGTCCTGCTGCAACTGTCATTGCACCTCAAGCCGTTAATGCGGTGCCAGCAACCGGCGGGTGGTTGAAAA AATGA
Upstream 100 bases:
>100_bases GTTTTTTTTTGATTAGTAATAAAGAGTTGTTAATTGAGCGTCCCAGGCGGTAACCGCACAGTGACACCTGTCAATTGTCA CTGAACAGGAAACCTTCCGG
Downstream 100 bases:
>100_bases CAGAGCATAATGAAGAAATGGTGCCGATGACACCGGCTAAAAAAGGGTTGCTGCGCAGCAAGACCTTCTGGGGGGCAACG GCCGGCGTCGTTGCCATCCT
Product: type IV B pilus protein
Products: NA
Alternate protein names: Secreted Protein; Lipoprotein; Type IV B Pilus Protein; Type IV Pilus Protein; Conjugal Transfer Protein; Type IV Pilus Operon Lipoprotein; Pilus Biogenesis Protein PilL; Exported Protein; Pilus Biogenesis Protein
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQVPEVVRYDRYLLVSTDPAAVQRDPLSQV IDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYRQALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCH SLRDGYQLPATQLPPVMEVPGKAILVPVSARPAATVIAPQAVNAVPATGGWLKK
Sequences:
>Translated_214_residues MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQVPEVVRYDRYLLVSTDPAAVQRDPLSQV IDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYRQALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCH SLRDGYQLPATQLPPVMEVPGKAILVPVSARPAATVIAPQAVNAVPATGGWLKK >Mature_214_residues MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQVPEVVRYDRYLLVSTDPAAVQRDPLSQV IDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYRQALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCH SLRDGYQLPATQLPPVMEVPGKAILVPVSARPAATVIAPQAVNAVPATGGWLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22993; Mature: 22993
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQVPEVVRYD CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCC RYLLVSTDPAAVQRDPLSQVIDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYR CEEEEECCCHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEHH QALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCHSLRDGYQLPATQLPPVMEVP HHCCHHHHHCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC GKAILVPVSARPAATVIAPQAVNAVPATGGWLKK CCEEEEEECCCCCEEEECCHHCCCCCCCCCCCCC >Mature Secondary Structure MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQVPEVVRYD CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCC RYLLVSTDPAAVQRDPLSQVIDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYR CEEEEECCCHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEHH QALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCHSLRDGYQLPATQLPPVMEVP HHCCHHHHHCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC GKAILVPVSARPAATVIAPQAVNAVPATGGWLKK CCEEEEEECCCCCEEEECCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA