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The map label for this gene is ssb [H]

Identifier: 157368561

GI number: 157368561

Start: 367777

End: 368283

Strand: Direct

Name: ssb [H]

Synonym: Spro_0312

Alternate gene names: 157368561

Gene position: 367777-368283 (Clockwise)

Preceding gene: 157368560

Following gene: 157368563

Centisome position: 6.75

GC content: 54.24

Gene sequence:

>507_bases
ATGGAGTCTCGCGGCGTAAACAAAGTCATACTTGTCGGTCATCTCGGCCAAGATCCGGAAGTCCGTTACATGCCAAATGG
TGGTGCTATTGCTAACATTACCCTGGCGACCTCAGAGAGCTGGCGCGATAAGGCGACCGGTGAGCAGAAAGAAAAAACCG
AATGGCACCGTGTCGTGCTGTTCGGCAAGCTTGCCGAAATTGCCGGTGAGTATTTGCGTACAGGCTCGCAGGTTTACATT
GAAGGTTCCCTGCAGACACGCAAATGGACCGATCAGGCCGGTGTGGAAAAATACACCACTGAAATCGTTGTCAACATTGG
CGGTACTCTGCAGATGTTGGGAGGGCGTTCGCAACCTGCCAACGGCGCACAATCAGGCCAGGGCAGTTGGGGGAAACCTC
AGCAACCACAACCTTCGCACAGCGGTACGCCGGCTCAGCAACCCCAGCCAGCTCAATCGGGTGGGAATTCAGCGCCGATG
GATTTTGACGATGACATACCCTTTTAA

Upstream 100 bases:

>100_bases
GCAACAATACGCGGAAAACTCTTTCTGATAACGCCCTCTACGCCTCGATTTTTCGGGGCGTTTTTCTCTTTCTAATTCTA
TTCCCTATGAGGATTCGATT

Downstream 100 bases:

>100_bases
AAAATATCTTAGAGTTTTATGTATAGAATAGCTCCTGAAGCCCCGATATTCGGGGCTTTCTTTATGTTTGGATAGGAAAA
GTTTGTCTGGGAGCTGTTGA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MESRGVNKVILVGHLGQDPEVRYMPNGGAIANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAEIAGEYLRTGSQVYI
EGSLQTRKWTDQAGVEKYTTEIVVNIGGTLQMLGGRSQPANGAQSGQGSWGKPQQPQPSHSGTPAQQPQPAQSGGNSAPM
DFDDDIPF

Sequences:

>Translated_168_residues
MESRGVNKVILVGHLGQDPEVRYMPNGGAIANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAEIAGEYLRTGSQVYI
EGSLQTRKWTDQAGVEKYTTEIVVNIGGTLQMLGGRSQPANGAQSGQGSWGKPQQPQPSHSGTPAQQPQPAQSGGNSAPM
DFDDDIPF
>Mature_168_residues
MESRGVNKVILVGHLGQDPEVRYMPNGGAIANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAEIAGEYLRTGSQVYI
EGSLQTRKWTDQAGVEKYTTEIVVNIGGTLQMLGGRSQPANGAQSGQGSWGKPQQPQPSHSGTPAQQPQPAQSGGNSAPM
DFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=32.4074074074074, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1790494, Length=188, Percent_Identity=63.8297872340426, Blast_Score=225, Evalue=1e-60,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18121; Mature: 18121

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRGVNKVILVGHLGQDPEVRYMPNGGAIANITLATSESWRDKATGEQKEKTEWHRVVL
CCCCCCCEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
FGKLAEIAGEYLRTGSQVYIEGSLQTRKWTDQAGVEKYTTEIVVNIGGTLQMLGGRSQPA
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEECCCEEEECCCCCCCC
NGAQSGQGSWGKPQQPQPSHSGTPAQQPQPAQSGGNSAPMDFDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MESRGVNKVILVGHLGQDPEVRYMPNGGAIANITLATSESWRDKATGEQKEKTEWHRVVL
CCCCCCCEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
FGKLAEIAGEYLRTGSQVYIEGSLQTRKWTDQAGVEKYTTEIVVNIGGTLQMLGGRSQPA
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEECCCEEEECCCCCCCC
NGAQSGQGSWGKPQQPQPSHSGTPAQQPQPAQSGGNSAPMDFDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12029035 [H]