Click here to switch to the map view.

The map label for this gene is secE [H]

Identifier: 157368520

GI number: 157368520

Start: 309660

End: 310043

Strand: Direct

Name: secE [H]

Synonym: Spro_0271

Alternate gene names: 157368520

Gene position: 309660-310043 (Clockwise)

Preceding gene: 157368519

Following gene: 157368521

Centisome position: 5.68

GC content: 53.91

Gene sequence:

>384_bases
ATGAGTGCGAATACCGAGGCTCAAGGGAGCGGGCGCGGCCTGGAAACGGCTAAATGGCTTATCGTCGCTGTTCTGTTGGT
TGTAGCGATTGTCGGTAACTATTTCTACCGTGATTTCAGCCTGCCATTACGCGCGCTGGCCGTTGTAGTGGTTATCGCTG
TTGCAGGCGCTGTGGCGCTGATGACGACCAAAGGCAAAGCCACCGTTGCGTTTGCACGCGAAGCGCGTACTGAAGTACGT
AAAGTGATCTGGCCAACTCGTCAGGAAACGCTACATACCACGTTGATCGTTGCCGCGGTAACTGCCGTGATGTCACTGAT
TCTGTGGGGGCTGGATGGTATTCTGGTCCGTCTGGTATCGTTTATTACTGGCCTGAGGTTCTAA

Upstream 100 bases:

>100_bases
AAAACACCGAAATGCTGCCGAGCAGCATCTGATCGGTTTGGTTTGCCTTGCAGTGCGAGGCAAAGTTGTCTGTTCTGAAT
TCATTGTGACAGGTTGGTTT

Downstream 100 bases:

>100_bases
AATGTCTGAAGCTCCAAAAAAACGTTGGTACGTCGTTCAGGCGTTTTCCGGTTTTGAAGGTCGCGTAGCGCAATCGCTGC
GTGAATACATCAAACTGCAT

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSANTEAQGSGRGLETAKWLIVAVLLVVAIVGNYFYRDFSLPLRALAVVVVIAVAGAVALMTTKGKATVAFAREARTEVR
KVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF

Sequences:

>Translated_127_residues
MSANTEAQGSGRGLETAKWLIVAVLLVVAIVGNYFYRDFSLPLRALAVVVVIAVAGAVALMTTKGKATVAFAREARTEVR
KVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF
>Mature_126_residues
SANTEAQGSGRGLETAKWLIVAVLLVVAIVGNYFYRDFSLPLRALAVVVVIAVAGAVALMTTKGKATVAFAREARTEVRK
VIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=127, Percent_Identity=88.1889763779528, Blast_Score=207, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13684; Mature: 13552

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANTEAQGSGRGLETAKWLIVAVLLVVAIVGNYFYRDFSLPLRALAVVVVIAVAGAVAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVS
HCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITGLRF
HHHHCCC
>Mature Secondary Structure 
SANTEAQGSGRGLETAKWLIVAVLLVVAIVGNYFYRDFSLPLRALAVVVVIAVAGAVAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVS
HCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITGLRF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]