Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is tatC [H]
Identifier: 157368502
GI number: 157368502
Start: 282569
End: 283339
Strand: Direct
Name: tatC [H]
Synonym: Spro_0253
Alternate gene names: 157368502
Gene position: 282569-283339 (Clockwise)
Preceding gene: 157368501
Following gene: 157368503
Centisome position: 5.19
GC content: 53.05
Gene sequence:
>771_bases ATGGCTGTTGAAGATACCCAACCCCTTATCAGTCACCTGATAGAACTGCGTAAGCGGTTGTTAAACTCGATTATCAGCAT ACTGGCGATCTTCCTGGTGCTGGTTTTTTTCGCCAATGATATTTACCAACTGGTGTCAGCACCGCTGATCAAGCAGTTGC CCGCCGGGGCGAGCATGATCGCCACCGACGTGGCTTCACCGTTCTTTACCCCGATCAAATTGACCATGATCGTCTCGGTG TTTGTGTCTGCTCCGGTGATCCTGTATCAGGTGTGGTCCTTCATCGCACCGGCGTTATACAAGCATGAACGCCGCCTGAT GATGCCTTTACTGGTCTCCAGCAGCCTGCTGTTTTATCTCGGCATGGCGTTTGCCTACTTTATCGTTTTCCCGCTGGCGT TCGGCTTTTTTGCCAAGACCGCACCGGCCGGGGTAATGATAGCGACCGACATTAATAACTATCTCGATTTCGTCATGGCG CTATTTATGGCGTTTGGCGTGGCGTTTGAGGTGCCGGTTGCCATTATTCTGCTGTGCTGGAGTGGCGTCACTTCACCGGA AGATCTGAAAAAGAAACGACCTTATGTTCTGGTCGGCGCTTTCGTGGTCGGTATGCTGTTGACCCCGCCGGATGTGTTCT CGCAAACCCTGCTGGCGATCCCGATGTATCTGCTGTTTGAAGTGGGCGTGTTCTTTGCCCGCTTCTACACCGGTAAGCGT CGTCCGCAGCCAGAAGAAGAAGACGAGGGTGACGAACCCCCGGCACCTTAA
Upstream 100 bases:
>100_bases GCCGGTTAAACAACCGGTCGTTTCGGGCGTTCAGGCAACCCCAGAACCTGTTGCGGATAAAACCCCAGCGTCTTACCAAC CTAGTGGCGATCGTTAAAAC
Downstream 100 bases:
>100_bases TTTCTGTTTGTTTCTAAGCCGCCCGATGGGCGGCTTTTACTTTGGGAACATCATGTTTGATATCGGCGTCAATCTCACCA GCTCACAATTTGCCAAAGAC
Product: twin-arginine protein translocation system subunit TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAVEDTQPLISHLIELRKRLLNSIISILAIFLVLVFFANDIYQLVSAPLIKQLPAGASMIATDVASPFFTPIKLTMIVSV FVSAPVILYQVWSFIAPALYKHERRLMMPLLVSSSLLFYLGMAFAYFIVFPLAFGFFAKTAPAGVMIATDINNYLDFVMA LFMAFGVAFEVPVAIILLCWSGVTSPEDLKKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYLLFEVGVFFARFYTGKR RPQPEEEDEGDEPPAP
Sequences:
>Translated_256_residues MAVEDTQPLISHLIELRKRLLNSIISILAIFLVLVFFANDIYQLVSAPLIKQLPAGASMIATDVASPFFTPIKLTMIVSV FVSAPVILYQVWSFIAPALYKHERRLMMPLLVSSSLLFYLGMAFAYFIVFPLAFGFFAKTAPAGVMIATDINNYLDFVMA LFMAFGVAFEVPVAIILLCWSGVTSPEDLKKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYLLFEVGVFFARFYTGKR RPQPEEEDEGDEPPAP >Mature_255_residues AVEDTQPLISHLIELRKRLLNSIISILAIFLVLVFFANDIYQLVSAPLIKQLPAGASMIATDVASPFFTPIKLTMIVSVF VSAPVILYQVWSFIAPALYKHERRLMMPLLVSSSLLFYLGMAFAYFIVFPLAFGFFAKTAPAGVMIATDINNYLDFVMAL FMAFGVAFEVPVAIILLCWSGVTSPEDLKKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYLLFEVGVFFARFYTGKRR PQPEEEDEGDEPPAP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=252, Percent_Identity=80.5555555555556, Blast_Score=422, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 28491; Mature: 28360
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVEDTQPLISHLIELRKRLLNSIISILAIFLVLVFFANDIYQLVSAPLIKQLPAGASMI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ATDVASPFFTPIKLTMIVSVFVSAPVILYQVWSFIAPALYKHERRLMMPLLVSSSLLFYL HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMAFAYFIVFPLAFGFFAKTAPAGVMIATDINNYLDFVMALFMAFGVAFEVPVAIILLCW HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGVTSPEDLKKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYLLFEVGVFFARFYTGKR CCCCCHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPQPEEEDEGDEPPAP CCCCCCCCCCCCCCCC >Mature Secondary Structure AVEDTQPLISHLIELRKRLLNSIISILAIFLVLVFFANDIYQLVSAPLIKQLPAGASMI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ATDVASPFFTPIKLTMIVSVFVSAPVILYQVWSFIAPALYKHERRLMMPLLVSSSLLFYL HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMAFAYFIVFPLAFGFFAKTAPAGVMIATDINNYLDFVMALFMAFGVAFEVPVAIILLCW HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGVTSPEDLKKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYLLFEVGVFFARFYTGKR CCCCCHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPQPEEEDEGDEPPAP CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]