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The map label for this gene is yabI [C]

Identifier: 157368495

GI number: 157368495

Start: 276348

End: 276878

Strand: Direct

Name: yabI [C]

Synonym: Spro_0246

Alternate gene names: 157368495

Gene position: 276348-276878 (Clockwise)

Preceding gene: 157368494

Following gene: 157368496

Centisome position: 5.07

GC content: 59.51

Gene sequence:

>531_bases
TTGAGCCTCAATGACATTATCCACTGGGTCAGCGACACCGTGCGGCAGCATGAAGCCTGGGCCATCCCGATTATCTTCTT
CCTGGCGTTCGGCGAGTCGCTGGCGTTTCTGTCGCTGCTGTTACCGGCCACGGTGATTCTGCTGGCGCTGGGAGCCTTGA
TAGGCGAAAGCGGCATTGCATTCTGGCCTATCTGGGCCGCCGCCGCCGCCGGGGCCTTTTTCGGCGACTGGCTCTCTTAC
TGGATTGGCTATCACTATCAAGACCGGGTGGCGCATATGTGGCCCCTTTCCCGCAATCCACAGCTACTCACGCGTGGCCA
TGCGTTTTTTGAACGCTGGGGCGTACTGGGCATTTTCATCGGCCGCTTCTTCGGCCCGTTGCGTGCCGTGGTGCCGTTGG
TTGGTGGTATTTGCGGCATGCCCCAGCGTTATTTCCAGGTGGCGAATATCACGTCGGCGATGATCTGGGCGTTTGGCATT
CTCGCGCCGGGGGCGTTTGGCATCAAGTGGTTAAGCCAGTGGTTTGGCTAG

Upstream 100 bases:

>100_bases
CTACCTCGAGTAAACTGCACGGGTGTTTAGCCGGGGTTTAATCGGCCCCGGCCGGCATTGCGTATCCTTGGGGCCATAAA
TCCCGCATCAGGAGCCCATA

Downstream 100 bases:

>100_bases
TTCTGGTCTGACTTGCGTAGCGTTTCGCAATTTTGCGCCGTTGGGGCAAAAACAGACTGGACATCCATACAGCATCCCCT
TAACGTGACGGGCAACAGGC

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSLNDIIHWVSDTVRQHEAWAIPIIFFLAFGESLAFLSLLLPATVILLALGALIGESGIAFWPIWAAAAAGAFFGDWLSY
WIGYHYQDRVAHMWPLSRNPQLLTRGHAFFERWGVLGIFIGRFFGPLRAVVPLVGGICGMPQRYFQVANITSAMIWAFGI
LAPGAFGIKWLSQWFG

Sequences:

>Translated_176_residues
MSLNDIIHWVSDTVRQHEAWAIPIIFFLAFGESLAFLSLLLPATVILLALGALIGESGIAFWPIWAAAAAGAFFGDWLSY
WIGYHYQDRVAHMWPLSRNPQLLTRGHAFFERWGVLGIFIGRFFGPLRAVVPLVGGICGMPQRYFQVANITSAMIWAFGI
LAPGAFGIKWLSQWFG
>Mature_175_residues
SLNDIIHWVSDTVRQHEAWAIPIIFFLAFGESLAFLSLLLPATVILLALGALIGESGIAFWPIWAAAAAGAFFGDWLSYW
IGYHYQDRVAHMWPLSRNPQLLTRGHAFFERWGVLGIFIGRFFGPLRAVVPLVGGICGMPQRYFQVANITSAMIWAFGIL
APGAFGIKWLSQWFG

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=152, Percent_Identity=34.8684210526316, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1789384, Length=164, Percent_Identity=29.8780487804878, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 19642; Mature: 19511

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNDIIHWVSDTVRQHEAWAIPIIFFLAFGESLAFLSLLLPATVILLALGALIGESGIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FWPIWAAAAAGAFFGDWLSYWIGYHYQDRVAHMWPLSRNPQLLTRGHAFFERWGVLGIFI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GRFFGPLRAVVPLVGGICGMPQRYFQVANITSAMIWAFGILAPGAFGIKWLSQWFG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SLNDIIHWVSDTVRQHEAWAIPIIFFLAFGESLAFLSLLLPATVILLALGALIGESGIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FWPIWAAAAAGAFFGDWLSYWIGYHYQDRVAHMWPLSRNPQLLTRGHAFFERWGVLGIFI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GRFFGPLRAVVPLVGGICGMPQRYFQVANITSAMIWAFGILAPGAFGIKWLSQWFG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]