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The map label for this gene is ugpQ [H]

Identifier: 157368487

GI number: 157368487

Start: 267641

End: 268390

Strand: Direct

Name: ugpQ [H]

Synonym: Spro_0238

Alternate gene names: 157368487

Gene position: 267641-268390 (Clockwise)

Preceding gene: 157368486

Following gene: 157368489

Centisome position: 4.91

GC content: 59.73

Gene sequence:

>750_bases
ATGATGACCACAGCCTGGCCTTACCCTCATATTGTTGCCCACCGTGGCGGTGGCTCTCTGGCACCGGAAAATACCCTGGC
GGCGATCGACGTTGGCGCACGTCACGGCCACAAAATGATTGAGTTCGACGCCAAGCTGGCGCAGGACGGGCAGATTTTTC
TGCTGCACGACGATACTCTGGATCGCACCAGCAACGGCTGGGGCGTAGCGGGCGAGTTGCCGTGGGACAAACTGGTGCAG
CTCGATGCCGGCAACTGGTATAACTCCGCCTACAAAGGCGAACGCTTACCCTTGCTGGCGGAGGTCGCGGAACGCTGCCT
GCAGCACGGTATGATGGCGAACATTGAAATCAAGCCCACCACCGGCAGTGATGACGAAACCGGCCGGGTAGTGGCGCTGG
CGGCACGCCTGCTGTGGCAGGGGCAGACCGATCCGCTGCTGTCTTCGTTCTCGGTTGAAGCGCTCGCAGCAGCACAACGC
ACCGTGCCTGAATTGCCGCGCGGCCTGTTGCTCGATCAGTGGGATGACAACTGGCCGGCGCTGACCGAACGCCTGGGTTG
CGTGTCTTTGCACATCAACCATAAAGAACTGACCGCCGAACGGGTGGCAGCACTGAAAGCGGCGGGATTACGCATTCTGG
TTTATACCGTTAACCAGCCGGCGCGGGCGCGCTTGTTGTTAAACTGGGGCGTTGACTGCATTTGCACGGACCGAATAGAT
TTGATTGGCCCCGATTTTCCCAATGGCTAA

Upstream 100 bases:

>100_bases
TATCGCATGAAACTATGCCGACGGCAGGCAGCACGCTATATTTACAACTGCCTGCACAGGCGCTGCACTTTTTTGATACC
GATAGCGGATTACGGATGGA

Downstream 100 bases:

>100_bases
CCTCGGTTGACCGGCGTCGGCAGCGGCGCCTGAGGTACCGCAGGCGTGGTGCGATCGAACGGATTGCGTGGTTGGTTGCC
ATTTGGCAGCAGTTTCCCGC

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MMTTAWPYPHIVAHRGGGSLAPENTLAAIDVGARHGHKMIEFDAKLAQDGQIFLLHDDTLDRTSNGWGVAGELPWDKLVQ
LDAGNWYNSAYKGERLPLLAEVAERCLQHGMMANIEIKPTTGSDDETGRVVALAARLLWQGQTDPLLSSFSVEALAAAQR
TVPELPRGLLLDQWDDNWPALTERLGCVSLHINHKELTAERVAALKAAGLRILVYTVNQPARARLLLNWGVDCICTDRID
LIGPDFPNG

Sequences:

>Translated_249_residues
MMTTAWPYPHIVAHRGGGSLAPENTLAAIDVGARHGHKMIEFDAKLAQDGQIFLLHDDTLDRTSNGWGVAGELPWDKLVQ
LDAGNWYNSAYKGERLPLLAEVAERCLQHGMMANIEIKPTTGSDDETGRVVALAARLLWQGQTDPLLSSFSVEALAAAQR
TVPELPRGLLLDQWDDNWPALTERLGCVSLHINHKELTAERVAALKAAGLRILVYTVNQPARARLLLNWGVDCICTDRID
LIGPDFPNG
>Mature_249_residues
MMTTAWPYPHIVAHRGGGSLAPENTLAAIDVGARHGHKMIEFDAKLAQDGQIFLLHDDTLDRTSNGWGVAGELPWDKLVQ
LDAGNWYNSAYKGERLPLLAEVAERCLQHGMMANIEIKPTTGSDDETGRVVALAARLLWQGQTDPLLSSFSVEALAAAQR
TVPELPRGLLLDQWDDNWPALTERLGCVSLHINHKELTAERVAALKAAGLRILVYTVNQPARARLLLNWGVDCICTDRID
LIGPDFPNG

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=109, Percent_Identity=36.697247706422, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI284055245, Length=89, Percent_Identity=38.2022471910112, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI284055240, Length=89, Percent_Identity=38.2022471910112, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI284055242, Length=89, Percent_Identity=38.2022471910112, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI21361649, Length=89, Percent_Identity=38.2022471910112, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1789858, Length=243, Percent_Identity=72.0164609053498, Blast_Score=369, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27313; Mature: 27313

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTAWPYPHIVAHRGGGSLAPENTLAAIDVGARHGHKMIEFDAKLAQDGQIFLLHDDTL
CCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEECHHHCCCCEEEEEECCCC
DRTSNGWGVAGELPWDKLVQLDAGNWYNSAYKGERLPLLAEVAERCLQHGMMANIEIKPT
CCCCCCCEEECCCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC
TGSDDETGRVVALAARLLWQGQTDPLLSSFSVEALAAAQRTVPELPRGLLLDQWDDNWPA
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHH
LTERLGCVSLHINHKELTAERVAALKAAGLRILVYTVNQPARARLLLNWGVDCICTDRID
HHHHCCEEEEEECHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCCCEEEECCEE
LIGPDFPNG
ECCCCCCCC
>Mature Secondary Structure
MMTTAWPYPHIVAHRGGGSLAPENTLAAIDVGARHGHKMIEFDAKLAQDGQIFLLHDDTL
CCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEECHHHCCCCEEEEEECCCC
DRTSNGWGVAGELPWDKLVQLDAGNWYNSAYKGERLPLLAEVAERCLQHGMMANIEIKPT
CCCCCCCEEECCCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC
TGSDDETGRVVALAARLLWQGQTDPLLSSFSVEALAAAQRTVPELPRGLLLDQWDDNWPA
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHH
LTERLGCVSLHINHKELTAERVAALKAAGLRILVYTVNQPARARLLLNWGVDCICTDRID
HHHHCCEEEEEECHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCCCEEEECCEE
LIGPDFPNG
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]