| Definition | Shewanella sediminis HAW-EB3, complete genome. |
|---|---|
| Accession | NC_009831 |
| Length | 5,517,674 |
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Identifier: 157375410
GI number:
Start: 2745709
End: 2749302
Strand: Reverse
Name: Not Available
Synonym: Ssed_2273
Alternate gene names: NA
Gene position: NA
Preceding gene: 157375411
Following gene: 157375409
Centisome position: NA
GC content: NA
Gene sequence:
>3594_bases ATGGCCAAGCAGGTAACCATAGACGGTGGAGAAGCCACAGCCTTCGTCGCTTATCGTACTAATGAAGTTTGCGCTATCTA CCCAATCACGCCGTCTTCGACCATGGCAGAATTGGCCGATCAGTGGGCCAGTCAGAATATTGAAAATATCTGGCAACAGG TGCCGCTTGTTGCCGAGATGCAGAGTGAAGGAGGTGCGGCCGGAACCGTACATGGCGCTCTGCAGACAGGCGCGCTGACC ACCACCTTTACCGCCTCTCAGGGACTGATGTTGATGATCCCTAACATGTTTAAGATTGCCGGCGAGTTAACGCCCACCGT GTTTCATGTTGCGGCGCGGGCCTTGTCGACCCAGGGTCTGTCGATCTTCGGCGATCATCAGGACGTGATGGCGGTACGAA TGACGGGGTTTGCCCAGCTGGTCTCTTCGTCGGTACAGGAGTGTCATGACATGGCACTGGTGTCACAGGCGGTGACACTC AACTGCCGCGTTCCTTTTATTCACTTCTTCGATGGCTTTCGTACCTCCCATGAGGTGAGCAAGATAGACCTGCTCGAAGA TGAACAGATAAAGACGATGATCGATGATGAAATGGTTTTTGCTCATCGTTCGCGGGCACTAAACCCGGATAACCCCTTCA TGCGTGGCAGTGCACAAAATCCGGATACCTATTTCCAGTCGCGGGAGTCCGCCAGTCGTTACTATAACGATGCCGTAGAG GCGGTAGACGTGGCACTGGACAGGTTCTATCAAGTCACAGGTCGCCGATATCATAGCTTCGAATACTATGGAGACAAGGA TGCTGAGCGGGTTATTGTCATCATGGGCTCTGGCAGCGAGACGGCGATAACCACGGCGCAGCATCTCAACGCACAAGATC ATGTTACGCAAAAGAGTAGAGTCGGTGTACTACGGGTGCGCCTGTATCGGCCTTTTAGCTGCGAGCACCTGCTCAAGGCG TTACCGCAATCGGTAACAAGTGTCGCCGTGTTAGACAGAACCAAGGAGCCCGGCAGCGATGGCGAGCCTCTATATAAAGA TGTCAGTAATGCACTCTATCAGGCGGTAAGCAGAGGCGATCGTAAAACCATGCCCGTGGTCATTGGCGGCCGCTATGGTT TAGCCAGCAAAGAGTTCACTCCTGCCATGGTGGCCAGGGTCTACCAGGAGCTTACAACTAAAGCGCCCAAGAACGATTTC ACTATCGGTATCATCGATGATGTCTGCCACAGTAGCCTGGAGGTGAAGGAGAGCCTGGACATCGAGTCTGACAAGCTGGT GCAGGCGATGTTTTATGGTCTGGGCTCCGACGGTACCGTCAGCGCCAACAAGAACAGCATCAAGATCATCGGCGGCGTCG AAGGATACTACGCCCAGGGGTATTTCGTTTATGACTCCAAGAAAGCCGGATCACAGACGGTTTCTCATCTGCGTTTCGGC CCCGAGCCTATTCGCGCGCCCTATCTTATCCAATCGGCAAACTTTATCGCCTGTCATCAATTCAGTTTCATCAAACATGT GGAGATGCTGGAACGGGCGAAGCAGGGGGCCACTTTCCTCTTAAATAGTCACTACGATGCCGATCAGATCTGGGATCAAC TTCCTGCCCATGTCCAACAGGAACTACTCGATAAGCAGATCAAATTCTATGTCATCGACGGAGCCAAGGTGGCCCGTTCG GTCGGCATGGGTAAGCGTATCAATACCGTGATGCAAACCTGTTTCTTCGCGCTCTCCGGTGTGATGCCCAAGGAGCAGGC TATCGAGCGGATCAAACAGGCGGCAGAAAAAACCTATGCCAAGAAGGGCGAAGAGGTGGTGAAGCGAAACTTTGCGGCCA TCGAGCAGGCCCTGGCTCATCTGCAGCGGGTTAACTTGCCTCGCAAGGTGAGTAACACCAGCGGTAGGGAGGCCGATGGG TTATTCGACCGCGCTTCCGGGTTTGTGAAAGAGGTGACCGCCGAGATGTTTCATGGCCGCGGCGATCGCATTCCCGTGAG CATGCTACCCGACGACGGCACCTATCCTACCGGCACCAGTCAGTATGAGAAGCGAAGTATTGCCAGTGAGATCCCTATCT GGGACAGGGAGATCTGCATTCAATGCGGTAACTGCGCCATTGTCTGTCCCCACGCCGCGATACGGGCTAAGTTTTATAAC AAACGTCGGCTGCAGGGAGCGCCAACGACATTCCCGTCGAGTAATGTCACATCCCGTGGCTTCCCCGATGCACGATACAC CTTGCAGGTTTATGCCGATGACTGTACCGGTTGCGGCCTGTGCGTGAAGGCCTGTCCCGTCAACCACACTGCCGACGAAC ATCACCACGCAATTAACATGCAGAATAAAGAGAAGCATCTGCAGGATGAACGCAGGAATCTGGAGTTTTTTGAGACCATC GCCTACAATCGGCGAACCCGGGTCGATTTTTCTAACGTTCGCGGCGTTCAGTTTCTGCAACCTCTGTTCGAGTTCTCGGG TGCCTGTAGCGGCTGCGGTGAGACTCCGTATCTGAAGCTACTCAGTCAGCTGTTTGGCGATCGTATGCTTGTGGCCAACG CGACAGGATGTTCATCGATCTATGGTGGCAACTTGCCGACCACGCCTTGGGCCAAGAACAGCGAAAACAAAGGCCCCGCA TGGGCGAACTCGCTGTTTGAAGACAATGCCGAGTTTGGGTATGGCTACCGCCTCACCGCGGATAAGCACCTCGAGTTGGC GCAATCCAGGCTATTGGCCTTAAAGGAGAGACTCGATCCTGAGCTGGTGGAGCAAACGGTTAATGCTCCACAATCCCATG AATCTGAGATACACGAGCAGCAGGAGCGGGTAAAAGATCTGACAGAGCAGTTACAGACGTTGGACGATCCCAGAGCCAAA GAGTTGCTGTCGGTTATCGATCACCTGGTGCGCCGCAGCATCTGGATAGTCGGTGGTGACGGCTGGGCCTATGACATCGG CTATGGCGGCGTCGACCATGTGCTAGCCAGCGGTCGTGACGTTAACATCTTAGTGATGGACACTGAGGTTTACTCCAATA CAGGTGGCCAATCATCCAAGGCAACCCCAATCGGAGCGGTCGCTAAGTTTGCGGCCGGAGGTAAGGCGGTGCCGAAGAAA GATCTGGCGCTGCAGGCCATCGCCTACGGAAACGTCTACGTGGCACGTATCGCCCTTGGCGCCAGCCCACAACAGACCCT GCAAGCCTTCCGTGAAGCCGAAGCCTATAACGGCCCGTCACTCATTATTGCCTACAGCCACTGTATCGAACACGGGATCA ATATGATCGATGGCATGCAGCAGCAAAATCTGGCGGTAAAGGCCGGCTACTGGCCCCTGTATCGTTACAATCCGACGCTG AGAAGTGCAGGACGTAACCCCTTTATGCTCGACTCACTACGCCCCACGTTGAAACTTGAGGATTACGCCTATAATGAAAA CAGATACCTTAGCCTGTTAAAGTCCGATCCGGATGAGGCCGCGCGCCTTATCAATCTGGCACGCCAGGTGGTAAACCAGA AATGGGCGCTGTATGAGGAGATGGCGACGCGAAATGCCCATAAGTTTACCCCTCATACCCGTAGTCGAACCTGA
Upstream 100 bases:
>100_bases GTACAGCCTGTACCTTACAGTGTCCCACCGGTGCCATACATATGGTCACGACGCGCTAACGGTAACGCTAACTCTAACGA AATTGCACAGGAGTCATGTT
Downstream 100 bases:
>100_bases TTGCTAACTTAACGCCTGGCTTGATACTGAGTTAGGTAAAAAAGATGATAAGCCGGCTTATTGACGAGTAGAAGCTATAG GTAAAAAGAAATAAAGAGTA
Product: putative pyruvate oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1197_residues MAKQVTIDGGEATAFVAYRTNEVCAIYPITPSSTMAELADQWASQNIENIWQQVPLVAEMQSEGGAAGTVHGALQTGALT TTFTASQGLMLMIPNMFKIAGELTPTVFHVAARALSTQGLSIFGDHQDVMAVRMTGFAQLVSSSVQECHDMALVSQAVTL NCRVPFIHFFDGFRTSHEVSKIDLLEDEQIKTMIDDEMVFAHRSRALNPDNPFMRGSAQNPDTYFQSRESASRYYNDAVE AVDVALDRFYQVTGRRYHSFEYYGDKDAERVIVIMGSGSETAITTAQHLNAQDHVTQKSRVGVLRVRLYRPFSCEHLLKA LPQSVTSVAVLDRTKEPGSDGEPLYKDVSNALYQAVSRGDRKTMPVVIGGRYGLASKEFTPAMVARVYQELTTKAPKNDF TIGIIDDVCHSSLEVKESLDIESDKLVQAMFYGLGSDGTVSANKNSIKIIGGVEGYYAQGYFVYDSKKAGSQTVSHLRFG PEPIRAPYLIQSANFIACHQFSFIKHVEMLERAKQGATFLLNSHYDADQIWDQLPAHVQQELLDKQIKFYVIDGAKVARS VGMGKRINTVMQTCFFALSGVMPKEQAIERIKQAAEKTYAKKGEEVVKRNFAAIEQALAHLQRVNLPRKVSNTSGREADG LFDRASGFVKEVTAEMFHGRGDRIPVSMLPDDGTYPTGTSQYEKRSIASEIPIWDREICIQCGNCAIVCPHAAIRAKFYN KRRLQGAPTTFPSSNVTSRGFPDARYTLQVYADDCTGCGLCVKACPVNHTADEHHHAINMQNKEKHLQDERRNLEFFETI AYNRRTRVDFSNVRGVQFLQPLFEFSGACSGCGETPYLKLLSQLFGDRMLVANATGCSSIYGGNLPTTPWAKNSENKGPA WANSLFEDNAEFGYGYRLTADKHLELAQSRLLALKERLDPELVEQTVNAPQSHESEIHEQQERVKDLTEQLQTLDDPRAK ELLSVIDHLVRRSIWIVGGDGWAYDIGYGGVDHVLASGRDVNILVMDTEVYSNTGGQSSKATPIGAVAKFAAGGKAVPKK DLALQAIAYGNVYVARIALGASPQQTLQAFREAEAYNGPSLIIAYSHCIEHGINMIDGMQQQNLAVKAGYWPLYRYNPTL RSAGRNPFMLDSLRPTLKLEDYAYNENRYLSLLKSDPDEAARLINLARQVVNQKWALYEEMATRNAHKFTPHTRSRT
Sequences:
NA
Specific function: NA
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA