| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is 157158614
Identifier: 157158614
GI number: 157158614
Start: 2180371
End: 2181519
Strand: Reverse
Name: 157158614
Synonym: EcE24377A_2214
Alternate gene names: NA
Gene position: 2181519-2180371 (Counterclockwise)
Preceding gene: 157157340
Following gene: 157158271
Centisome position: 43.81
GC content: 42.12
Gene sequence:
>1149_bases ATGGCTGAAAATAAAATTTACGCTGTGTTAACTGATCGTGGCGCGCAGTTAGAAGCTGCGGCGCTGGCGTCAGGAGTGCC GGTACTGCTAAATAAATTCGTTATTGGTGACGCGAACGGAAACGACGACGTAACGCCAGACCCGGCCCGAACGGCATTAA TTCACGAGACGTATCGCGGAGATATTAAATCGTCAGAAAATAGCGGTAATCAAGTCATTTTTACACTATACGTACCACCG GAAACCGGCGGCTATACTATCCGTGAGGTGGGAATATTAACCGACAAAGGTGAACTGTACTCTGTAGCGCGTTCGCCGGA TATTTTAAAACCTACGGACAGTAACGGCGCACTGATTTCAATCACGTATAAATACACCCTCGCGGTGTCCAGCACATCTA CTGTTAACGTAGTTATTGATAACAGTAGCGGAATGAACCAGGCAGATGCTGATAAGCGCTATTTGCAGATAAGCAAAAAT TTATCTGAAATTAAAAATAAGGGCGAATCCGCTCAACGAGCAGGGCGGGAGAATCTCGGTATTGATTTAGACGATTATTA CGATAAAACTGAGATTGATAGCAAATTTACTGATATTGATGAAGATATTAATAATATAAATAAAACAAAACCTGTTCTTA CAGTAAATAATATACAGCCTGATGCTACTGGGAATGTAAATACAGGTTCCGGATTTGCAAAACCAAACGGCGATGGGGCG TTTAATCTGGTTATGTTATACGGCGGTGACCACGTCAGTGTTACTCCTGCGATGACAATCGTAACAGGTTATGATGTATC CCCGTACGCGATAAATCCAACCAATGTAAACGCCGATGTGGAAACTTATTTGTGCGGTGCGTGGATGACGTTAGCGGCAA CGAGTGGAAATGCGTTAGTGATGGCGCAGCGAATTCCCATTGGGAATATATCAAAAATGTTAAATATACGAGATCCGTAT TACCCGAATAAACACGGAACCGTTAACTCATATGATCACAATTATATCTGCGTTAAATGTAATATTGAAGGAATAGATAA TGACATCATATTTACGTCAAATCTGAAAGACGTTGAGGAATATGGTGTGCAGGTTTTCCAGAACGCCAAAAATGGTATTT ACGGCACCGTTATAGACGAAGGTCATTGA
Upstream 100 bases:
>100_bases GTAAATATACCGGCAGATGGTGATGGTGGCGTGAAATTAAATGGCGGATTATATATATCAGGCTCGCCAATTGTTAGTTT AAACGTGGAGATAGACCCAA
Downstream 100 bases:
>100_bases GAGTAAAATAAATGAGCACTAATTTTTTGCACGGCCCACGCACGCTAGAATACGACGACGGCACAAAAGAGATCAGCGCG GTAGATATTTCAGTTATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Tail Fibre Protein-Like Protein; Phage Tail Fiber Protein; Tail Collar Domain Protein; Variable Tail Fibre Protein; Phage Tail Collar Domain-Containing Protein; Tail Fiber-Related Protein; Phage Tail Collar Domain Protein; Variable Tail Fiber Protein; Bacteriophage Tail Protein; Phage Tail Fibre Protein; Bacteriophage Variable Tail Fiber Protein H; Phage Tail Fiber Protein H; Tail Fiber Protein H; Side Tail Phage Protein; Phage Variable Tail Fiber Protein; Phage Tail Fiber Domain Protein; Tail Fiber Domain Protein; Phage Tail Fiber-Like Protein; Tail Fiber Domain-Containing Protein; Phage Tail Collar; Bacteriophage Variable Tail Fibre Protein; Phage Protein GpH; Tail Fiber Repeat 2-Containing Protein
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MAENKIYAVLTDRGAQLEAAALASGVPVLLNKFVIGDANGNDDVTPDPARTALIHETYRGDIKSSENSGNQVIFTLYVPP ETGGYTIREVGILTDKGELYSVARSPDILKPTDSNGALISITYKYTLAVSSTSTVNVVIDNSSGMNQADADKRYLQISKN LSEIKNKGESAQRAGRENLGIDLDDYYDKTEIDSKFTDIDEDINNINKTKPVLTVNNIQPDATGNVNTGSGFAKPNGDGA FNLVMLYGGDHVSVTPAMTIVTGYDVSPYAINPTNVNADVETYLCGAWMTLAATSGNALVMAQRIPIGNISKMLNIRDPY YPNKHGTVNSYDHNYICVKCNIEGIDNDIIFTSNLKDVEEYGVQVFQNAKNGIYGTVIDEGH
Sequences:
>Translated_382_residues MAENKIYAVLTDRGAQLEAAALASGVPVLLNKFVIGDANGNDDVTPDPARTALIHETYRGDIKSSENSGNQVIFTLYVPP ETGGYTIREVGILTDKGELYSVARSPDILKPTDSNGALISITYKYTLAVSSTSTVNVVIDNSSGMNQADADKRYLQISKN LSEIKNKGESAQRAGRENLGIDLDDYYDKTEIDSKFTDIDEDINNINKTKPVLTVNNIQPDATGNVNTGSGFAKPNGDGA FNLVMLYGGDHVSVTPAMTIVTGYDVSPYAINPTNVNADVETYLCGAWMTLAATSGNALVMAQRIPIGNISKMLNIRDPY YPNKHGTVNSYDHNYICVKCNIEGIDNDIIFTSNLKDVEEYGVQVFQNAKNGIYGTVIDEGH >Mature_381_residues AENKIYAVLTDRGAQLEAAALASGVPVLLNKFVIGDANGNDDVTPDPARTALIHETYRGDIKSSENSGNQVIFTLYVPPE TGGYTIREVGILTDKGELYSVARSPDILKPTDSNGALISITYKYTLAVSSTSTVNVVIDNSSGMNQADADKRYLQISKNL SEIKNKGESAQRAGRENLGIDLDDYYDKTEIDSKFTDIDEDINNINKTKPVLTVNNIQPDATGNVNTGSGFAKPNGDGAF NLVMLYGGDHVSVTPAMTIVTGYDVSPYAINPTNVNADVETYLCGAWMTLAATSGNALVMAQRIPIGNISKMLNIRDPYY PNKHGTVNSYDHNYICVKCNIEGIDNDIIFTSNLKDVEEYGVQVFQNAKNGIYGTVIDEGH
Specific function: Unknown
COG id: COG5301
COG function: function code R; Phage-related tail fibre protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41334; Mature: 41203
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENKIYAVLTDRGAQLEAAALASGVPVLLNKFVIGDANGNDDVTPDPARTALIHETYRG CCCCEEEEEEECCCCCEEHHHHHCCCHHHEEEEEEECCCCCCCCCCCHHHHEEEEHHHCC DIKSSENSGNQVIFTLYVPPETGGYTIREVGILTDKGELYSVARSPDILKPTDSNGALIS CCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEE ITYKYTLAVSSTSTVNVVIDNSSGMNQADADKRYLQISKNLSEIKNKGESAQRAGRENLG EEEEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHCC IDLDDYYDKTEIDSKFTDIDEDINNINKTKPVLTVNNIQPDATGNVNTGSGFAKPNGDGA CCHHHCCCCHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE FNLVMLYGGDHVSVTPAMTIVTGYDVSPYAINPTNVNADVETYLCGAWMTLAATSGNALV EEEEEEECCCEEEECEEEEEEECCCCCCEEECCCCCCCCHHEEEEEEEEEEEECCCCEEE MAQRIPIGNISKMLNIRDPYYPNKHGTVNSYDHNYICVKCNIEGIDNDIIFTSNLKDVEE EEECCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCHHHHH YGVQVFQNAKNGIYGTVIDEGH HHHHHHHHCCCCEEEEEEECCC >Mature Secondary Structure AENKIYAVLTDRGAQLEAAALASGVPVLLNKFVIGDANGNDDVTPDPARTALIHETYRG CCCEEEEEEECCCCCEEHHHHHCCCHHHEEEEEEECCCCCCCCCCCHHHHEEEEHHHCC DIKSSENSGNQVIFTLYVPPETGGYTIREVGILTDKGELYSVARSPDILKPTDSNGALIS CCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEE ITYKYTLAVSSTSTVNVVIDNSSGMNQADADKRYLQISKNLSEIKNKGESAQRAGRENLG EEEEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHCC IDLDDYYDKTEIDSKFTDIDEDINNINKTKPVLTVNNIQPDATGNVNTGSGFAKPNGDGA CCHHHCCCCHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE FNLVMLYGGDHVSVTPAMTIVTGYDVSPYAINPTNVNADVETYLCGAWMTLAATSGNALV EEEEEEECCCEEEECEEEEEEECCCCCCEEECCCCCCCCHHEEEEEEEEEEEECCCCEEE MAQRIPIGNISKMLNIRDPYYPNKHGTVNSYDHNYICVKCNIEGIDNDIIFTSNLKDVEE EEECCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCHHHHH YGVQVFQNAKNGIYGTVIDEGH HHHHHHHHCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA