| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is 157157565
Identifier: 157157565
GI number: 157157565
Start: 2178324
End: 2178836
Strand: Reverse
Name: 157157565
Synonym: EcE24377A_2212
Alternate gene names: NA
Gene position: 2178836-2178324 (Counterclockwise)
Preceding gene: 157158271
Following gene: 157156634
Centisome position: 43.76
GC content: 43.47
Gene sequence:
>513_bases ATGTCAGACAGCAACGCTTACCGCGCGTTTGCGCTATTCGTGCAGGGCGAACGGGTTTTAAATTGTACTGAATATACTCC TGTCGATATGAAAATAATCGAGGACGAGTTTAAAACAGGCGCGATGGATACAGCCATCACATTAGATGGCGGTATGGAGA AAATGTCAGCCAGTTTTAAAGTTTCGGGTTCTGATTCTGGTGTTATGAGCTATTTCGGGTTAATACCGGGAGTCAAGACG CGGTTTGAAATTCGTAGTGCGTACACAGACTCCTATGGAATAAATTTTGAGCGTATTGATACCTACGAGGGACTTATTAC GGCAATCACTGATGACGCTCAGGGGACTGATTCAAAATCGTCAGTGGGGCAATCAGTAACGATTGCGCCGAGCTATTATA AACGAGTTCAAAATGGACGAATTATTTACGAAATTCATCCTGCAAAAATGAAACGCGTTATCAACGGTGTTGATGTTCTT GCGGGCGTCGCTCGAATCCTTCATGTATATTAA
Upstream 100 bases:
>100_bases CACAAACAATTACGTTAATGTACCGCGTTAATAATGACTATACAGTTGAAGCGCTGGCCTCCCTTTTTAAAGAAACAGCC TGATAATTCGGAGATTAAAT
Downstream 100 bases:
>100_bases AAGGTAAGTAAAATGGAATCCTTATTAGACAGTATGACTATTACGCTCTCTCGACCGTTTATTATTAAGGGCGAGAGCTG CGATACAATTACTATTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Tube Protein; Pyocin R2_PP Tail Tube Protein GpFII; Phage Tail Tube Protein FII; Phage Tail Tube Protein; Pyocin R2_PP Tail Tube Protein
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSDSNAYRAFALFVQGERVLNCTEYTPVDMKIIEDEFKTGAMDTAITLDGGMEKMSASFKVSGSDSGVMSYFGLIPGVKT RFEIRSAYTDSYGINFERIDTYEGLITAITDDAQGTDSKSSVGQSVTIAPSYYKRVQNGRIIYEIHPAKMKRVINGVDVL AGVARILHVY
Sequences:
>Translated_170_residues MSDSNAYRAFALFVQGERVLNCTEYTPVDMKIIEDEFKTGAMDTAITLDGGMEKMSASFKVSGSDSGVMSYFGLIPGVKT RFEIRSAYTDSYGINFERIDTYEGLITAITDDAQGTDSKSSVGQSVTIAPSYYKRVQNGRIIYEIHPAKMKRVINGVDVL AGVARILHVY >Mature_169_residues SDSNAYRAFALFVQGERVLNCTEYTPVDMKIIEDEFKTGAMDTAITLDGGMEKMSASFKVSGSDSGVMSYFGLIPGVKTR FEIRSAYTDSYGINFERIDTYEGLITAITDDAQGTDSKSSVGQSVTIAPSYYKRVQNGRIIYEIHPAKMKRVINGVDVLA GVARILHVY
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18726; Mature: 18595
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSNAYRAFALFVQGERVLNCTEYTPVDMKIIEDEFKTGAMDTAITLDGGMEKMSASFK CCCCCCEEEEEEEEECCEEEEECCCCCCCCEEEHHHHCCCCCCEEEEECCCHHHHCCEEE VSGSDSGVMSYFGLIPGVKTRFEIRSAYTDSYGINFERIDTYEGLITAITDDAQGTDSKS ECCCCCHHHHHHHHCCCCCHHEEEHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCH SVGQSVTIAPSYYKRVQNGRIIYEIHPAKMKRVINGVDVLAGVARILHVY HCCCEEEECHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDSNAYRAFALFVQGERVLNCTEYTPVDMKIIEDEFKTGAMDTAITLDGGMEKMSASFK CCCCCEEEEEEEEECCEEEEECCCCCCCCEEEHHHHCCCCCCEEEEECCCHHHHCCEEE VSGSDSGVMSYFGLIPGVKTRFEIRSAYTDSYGINFERIDTYEGLITAITDDAQGTDSKS ECCCCCHHHHHHHHCCCCCHHEEEHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCH SVGQSVTIAPSYYKRVQNGRIIYEIHPAKMKRVINGVDVLAGVARILHVY HCCCEEEECHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA