| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is 157156927
Identifier: 157156927
GI number: 157156927
Start: 2186358
End: 2187392
Strand: Reverse
Name: 157156927
Synonym: EcE24377A_2223
Alternate gene names: NA
Gene position: 2187392-2186358 (Counterclockwise)
Preceding gene: 157158086
Following gene: 157156700
Centisome position: 43.93
GC content: 52.27
Gene sequence:
>1035_bases ATGAGCGATTCGTTTACTACGTCAGAACTGATTACCGCAACGCAGCAGGTATTTAAGTTCAATCCGTTGTTTTTAAGATT GTTTTTCCGTGAGACCTACACGTTTACGAGCGAAGAGGTTTTTCTGGATAAAATCCCGGGCAAAGTCAATATGGCGGTAT ATTGCGCCCCGATGATCACCGGCAAAGTTGACCGCACTCGCGGCTATTCAACGAACCACTTTAAACCGGGTTACACGAAA CCGAAACACACGATCAATCCGAATATGAGCATCAAGCGCGCCGCCGGTGAGCAAATTGGCCAGCCAGAAACGCCGGTCGA ACGTCGTGCAAAAATCATCATGCAGAATTTGCTCGACGAGGAGCTCAGCATCAGCCAGCTCGAAGAGTTCCAGGCAGTGC AGGCGGTTCTGTACGGTAAATACACCGTTTCCGGCAGCAATATCGAGACCTATGAGATCGACATGAGCCGCAGCGCGACG AATAACGTCACTCAGTCCGGTTCGACCGCCTGGTCGACTCAGGACGCGGAAACGTATGACCCGAGCGACGATATTGAATC CTATGCAGACCTCGCCTCCGGTGCGGTTAACGTGATCATCATGGACGGTAAAGCCTGGAAGCAGCTTAAACGCTTTAAAA AATTCTGGACGGCACTGGATACGCGCCGCGGCTCAAACAGTCAGCTCGAAGTCGCGCTGAAAAACCTGGGCGATGTCGTT AGCTTTAAGGGCTACTACGGCGACACGGCGCTGTTTGTCTACAAAGGGCAATACATCGACCCGGTAACAGGCACTGAAAC GCGTTATATGCCGGATAACACGATGATCCTTGGCAACACAAAAAACCGCGGGCTCCGCACTTATGGCGCAATTCAGGACG AAGACGCGCTGAAAGAGGGTATTTGCGAAGCGACGCGCTATCCAAAAGTCTGGACCACTACCGGTGATCCGGCAGTGACG CAAACAATGACGCAATCCGCGCCAGCAATGGTCCTCACGGACGCCGACGCGTTCGTTGTCGTAAAAATCGCGTAA
Upstream 100 bases:
>100_bases AAATCAGCGTTTGCTGGTACGCCAGTCAGCGTTGGCTGATAGCAAAAAAAAAACTCAAAACAAGCCGCCTCCGGGCGGTT TTTTTATACAGGATATATAA
Downstream 100 bases:
>100_bases GAGCCGAAAGGCTCTTTTTTGTTAAGGAATCAACATGAGCACAAAAACAGAATTGCTGGCGCGCATTGACGATCTGAGCG CTCAGCTTGGTCGCGAATTA
Product: phage major capsid protein E
Products: NA
Alternate protein names: Head protein gp7 [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSDSFTTSELITATQQVFKFNPLFLRLFFRETYTFTSEEVFLDKIPGKVNMAVYCAPMITGKVDRTRGYSTNHFKPGYTK PKHTINPNMSIKRAAGEQIGQPETPVERRAKIIMQNLLDEELSISQLEEFQAVQAVLYGKYTVSGSNIETYEIDMSRSAT NNVTQSGSTAWSTQDAETYDPSDDIESYADLASGAVNVIIMDGKAWKQLKRFKKFWTALDTRRGSNSQLEVALKNLGDVV SFKGYYGDTALFVYKGQYIDPVTGTETRYMPDNTMILGNTKNRGLRTYGAIQDEDALKEGICEATRYPKVWTTTGDPAVT QTMTQSAPAMVLTDADAFVVVKIA
Sequences:
>Translated_344_residues MSDSFTTSELITATQQVFKFNPLFLRLFFRETYTFTSEEVFLDKIPGKVNMAVYCAPMITGKVDRTRGYSTNHFKPGYTK PKHTINPNMSIKRAAGEQIGQPETPVERRAKIIMQNLLDEELSISQLEEFQAVQAVLYGKYTVSGSNIETYEIDMSRSAT NNVTQSGSTAWSTQDAETYDPSDDIESYADLASGAVNVIIMDGKAWKQLKRFKKFWTALDTRRGSNSQLEVALKNLGDVV SFKGYYGDTALFVYKGQYIDPVTGTETRYMPDNTMILGNTKNRGLRTYGAIQDEDALKEGICEATRYPKVWTTTGDPAVT QTMTQSAPAMVLTDADAFVVVKIA >Mature_343_residues SDSFTTSELITATQQVFKFNPLFLRLFFRETYTFTSEEVFLDKIPGKVNMAVYCAPMITGKVDRTRGYSTNHFKPGYTKP KHTINPNMSIKRAAGEQIGQPETPVERRAKIIMQNLLDEELSISQLEEFQAVQAVLYGKYTVSGSNIETYEIDMSRSATN NVTQSGSTAWSTQDAETYDPSDDIESYADLASGAVNVIIMDGKAWKQLKRFKKFWTALDTRRGSNSQLEVALKNLGDVVS FKGYYGDTALFVYKGQYIDPVTGTETRYMPDNTMILGNTKNRGLRTYGAIQDEDALKEGICEATRYPKVWTTTGDPAVTQ TMTQSAPAMVLTDADAFVVVKIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lambda phage gpE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005564 [H]
Pfam domain/function: PF03864 Phage_cap_E [H]
EC number: NA
Molecular weight: Translated: 38426; Mature: 38295
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSFTTSELITATQQVFKFNPLFLRLFFRETYTFTSEEVFLDKIPGKVNMAVYCAPMIT CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHEECCCCCEEEEEEEEEHHC GKVDRTRGYSTNHFKPGYTKPKHTINPNMSIKRAAGEQIGQPETPVERRAKIIMQNLLDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHH ELSISQLEEFQAVQAVLYGKYTVSGSNIETYEIDMSRSATNNVTQSGSTAWSTQDAETYD HCCHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC PSDDIESYADLASGAVNVIIMDGKAWKQLKRFKKFWTALDTRRGSNSQLEVALKNLGDVV CHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCE SFKGYYGDTALFVYKGQYIDPVTGTETRYMPDNTMILGNTKNRGLRTYGAIQDEDALKEG EECCCCCCEEEEEEECCEECCCCCCCCEECCCCCEEEECCCCCCCEEECCCCCHHHHHHH ICEATRYPKVWTTTGDPAVTQTMTQSAPAMVLTDADAFVVVKIA HHHHHCCCEEEECCCCCHHHHHHHCCCCEEEEECCCEEEEEEEC >Mature Secondary Structure SDSFTTSELITATQQVFKFNPLFLRLFFRETYTFTSEEVFLDKIPGKVNMAVYCAPMIT CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHEECCCCCEEEEEEEEEHHC GKVDRTRGYSTNHFKPGYTKPKHTINPNMSIKRAAGEQIGQPETPVERRAKIIMQNLLDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHH ELSISQLEEFQAVQAVLYGKYTVSGSNIETYEIDMSRSATNNVTQSGSTAWSTQDAETYD HCCHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC PSDDIESYADLASGAVNVIIMDGKAWKQLKRFKKFWTALDTRRGSNSQLEVALKNLGDVV CHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCE SFKGYYGDTALFVYKGQYIDPVTGTETRYMPDNTMILGNTKNRGLRTYGAIQDEDALKEG EECCCCCCEEEEEEECCEECCCCCCCCEECCCCCEEEECCCCCCCEEECCCCCHHHHHHH ICEATRYPKVWTTTGDPAVTQTMTQSAPAMVLTDADAFVVVKIA HHHHHCCCEEEECCCCCHHHHHHHCCCCEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]