Click here to switch to the map view.

The map label for this gene is asmA

Identifier: 157155494

GI number: 157155494

Start: 2322864

End: 2324717

Strand: Reverse

Name: asmA

Synonym: EcE24377A_2357

Alternate gene names: 157155494

Gene position: 2324717-2322864 (Counterclockwise)

Preceding gene: 157157097

Following gene: 157158902

Centisome position: 46.68

GC content: 52.64

Gene sequence:

>1854_bases
ATGAGACGATTTCTGACGACGCTGATGATACTCCTGGTCGTGCTGGTGGCCGGGTTATCTGCGTTAGTGTTGCTGGTGAA
TCCGAATGATTTCCGCGACTATATGGTCAAGCAAGTTGCTGCACGTAGCGGTTATCAATTGCAGCTCGACGGGCCACTGC
GTTGGCACGTCTGGCCGCAGCTTAGTATCCTCTCCGGGCGAATGTCTCTCACCGCCCAGGGCGCAAGCCAGCCACTGGTT
CGCGCCGACAACATGCGTCTGGACGTGGCGCTTTTACCACTACTGAGTCATCAACTGAGCGTTAAGCAGGTGATGCTAAA
AGGGGCAGTGATTCAACTGACGCCGCAGACGGAAGCGGTGCGCAGTGAAGACGCTCCGGTTGCACCGCGCGACAATACCT
TGCCGGATCTGTCAGACGATCGCGGATGGTCGTTTGATATATCCAGTCTTAAGGTGGCGGACAGCGTGCTGGTGTTCCAG
CATGAAGATGACGAGCAGGTGACAATCCGCAATATTCGCCTGCAAATGGAACAAGATCCCCAACATCGTGGTTCATTTGA
GTTCTCCGGGCGGGTTAATCGCGATCAGCGCGATCTCACGATATCCCTTAACGGTACGGTAGATGCTTCTGATTATCCGC
ATGATTTAACGGCGGCTATTGAACAAATTAACTGGCAGTTGCAGGGTGCAGATTTACCAAAACAAGGTATTCAGGGGCAG
GGGAGTTTCCAGGCCCAGTGGCAGGAGTCACATAAACGCCTTTCATTTAACCAAATCAGCTTGACCGCCAATGACAGCAC
GCTGAGCGGGCAAGCACAGGTCACGCTGACAGAGAAACCTGAATGGCAGCTGAGACTGCAATTCCCGCAACTGAATCTTG
ACAACCTCATCCCGCTTAATGAAACAGCGAATGGTGAAAACGGTGCCGCGCAGCAGGGGCAGAGCCAATCAACATTGCCG
CGCCCGGTCATTTCTTCGCGTATTGATGAACCGGCATATCAGGGACTGCAAGGCTTTACGGCTGATATTTTGTTGCAGGC
CAGTAACGTGCGCTGGCGCGGAATGAATTTTACAGATGTTGCCACGCAAATGACCAACAAGTCGGGTTTGCTGGAGATTA
CTCAACTGCAGGGCAAGCTTAACGGTGGACAGGTTTCACTGCCGGGCACGCTGGACGCGACATCAATAAATCCGCGGATA
AACTTCCAGCCACGGCTGGAAAACGTTGAGATTGGTACCATTCTGAAGGCGTTTAACTATCCGATTTCGTTGACCGGAAA
AATGTCACTGGCTGGTGATTTCTCCGGTGCTGACATAGATGCCGACGCATTCCGCCACAACTGGCAAGGACAGGCACATG
TCGAAATGACCGACACGCGCATGGAAGGGATGAACTTCCAGCAGATGATTCAGCAAGCGGTAGAGCGTAATGGCGGTGAT
GTGAAGGCCGCTGAAAACTTCGATAACGTGACGCGGCTTGACCGCTTTACCACCGATTTGACGTTGAAGGATGGCGTCGT
GACGTTAAACGACATGCAAGGTCAATCGCCTGTGCTGGCGCTGACAGGGGAAGGCATGTTGAATCTGGCAGATCAAACCT
GCGACACCCAGTTTGATATTCGGGTCGTGGGTGGCTGGAACGGGGAAAGCAAACTGATTGATTTCCTCAAAGAAACGCCA
GTACCGCTGCGGGTTTATGGCAACTGGCAGCAACTCAATTACAGTCTGCAAGTGGATCAGTTACTGCGCAAACATCTACA
GGACGAAGCGAAACGTCGCCTGAATGACTGGGCCGAGCGGAATAAAGATTCCCGCAATGGCAAAGATGTGAAGAAGTTGC
TGGAGAAGATGTAG

Upstream 100 bases:

>100_bases
ACGACCTTACAACCGCCGTGAAGATGCGAAATATCGCAATCAGCAGGGCGCGGTAGCCAGCCGAATCGATAAAGACTAAT
TCAGGCCCATTGAGGATACC

Downstream 100 bases:

>100_bases
GTTACCAGGTGACCTGTCCTGTAGGCCTGATAAGACGCGTAAAGCGTCGCATCAGGCGTTCGCGGCGGCACCATTATATT
CTGAATATGTAAGATCGAAG

Product: putative assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLV
RADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIQGQ
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLP
RPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRI
NFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETP
VPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM

Sequences:

>Translated_617_residues
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLV
RADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIQGQ
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLP
RPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRI
NFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETP
VPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM
>Mature_617_residues
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLV
RADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIQGQ
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLP
RPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRI
NFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETP
VPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=617, Percent_Identity=100, Blast_Score=1255, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ASMA_ECOLI (P28249)

Other databases:

- EMBL:   U11035
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   M90069
- PIR:   G64972
- RefSeq:   AP_002664.1
- RefSeq:   NP_416568.1
- DIP:   DIP-9175N
- STRING:   P28249
- EnsemblBacteria:   EBESCT00000003652
- EnsemblBacteria:   EBESCT00000016987
- GeneID:   946582
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2049
- KEGG:   eco:b2064
- EchoBASE:   EB1336
- EcoGene:   EG11361
- eggNOG:   COG2982
- GeneTree:   EBGT00050000010252
- HOGENOM:   HBG391367
- OMA:   EQTCDTQ
- ProtClustDB:   PRK10833
- BioCyc:   EcoCyc:EG11361-MONOMER
- Genevestigator:   P28249
- InterPro:   IPR007844

Pfam domain/function: PF05170 AsmA

EC number: NA

Molecular weight: Translated: 68964; Mature: 68964

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ
CHHHHHHHHHHHHHHHHCHHEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCC
LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV
EEEECCCEEEEECCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEECCCHHHH
RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQHEDDEQVTIRNIRLQMEQDP
CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECEEEEEEECCCCEEEEEEEEEEECCCC
QHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIQGQ
CCCCCEEECCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHCEEEECCCCCHHCCCCC
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLN
CCCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEECCC
ETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDV
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCEEEEEEECCCEECCCCHHHH
ATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRINFQPRLENVEIGTILKAFNY
HHHHCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCC
PISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
CEEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEEECCHHCCCCHHHHHHHHHHCCCCC
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALTGEGMLNLADQTCDTQFDI
EEECCCCHHHHHHHHHHCCEEECCCEEEEECCCCCCCEEEEECCCCEEECCCCCCCEEEE
RVVGGWNGESKLIDFLKETPVPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAER
EEEECCCCHHHHHHHHHCCCCCEEEECCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHC
NKDSRNGKDVKKLLEKM
CCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ
CHHHHHHHHHHHHHHHHCHHEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCC
LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV
EEEECCCEEEEECCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEECCCHHHH
RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQHEDDEQVTIRNIRLQMEQDP
CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECEEEEEEECCCCEEEEEEEEEEECCCC
QHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIQGQ
CCCCCEEECCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHCEEEECCCCCHHCCCCC
GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLN
CCCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEECCC
ETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDV
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCEEEEEEECCCEECCCCHHHH
ATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRINFQPRLENVEIGTILKAFNY
HHHHCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCC
PISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD
CEEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEEECCHHCCCCHHHHHHHHHHCCCCC
VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALTGEGMLNLADQTCDTQFDI
EEECCCCHHHHHHHHHHCCEEECCCEEEEECCCCCCCEEEEECCCCEEECCCCCCCEEEE
RVVGGWNGESKLIDFLKETPVPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAER
EEEECCCCHHHHHHHHHCCCCCEEEECCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHC
NKDSRNGKDVKKLLEKM
CCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907