| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is 157163749
Identifier: 157163749
GI number: 157163749
Start: 4537492
End: 4538295
Strand: Reverse
Name: 157163749
Synonym: EcHS_A4531
Alternate gene names: NA
Gene position: 4538295-4537492 (Counterclockwise)
Preceding gene: 157163750
Following gene: 157163748
Centisome position: 97.73
GC content: 47.64
Gene sequence:
>804_bases ATGGGTGAAGTTATCTCCGTTTTTGAATATGACCTCTTGGGGAGTGGAAAAGCGGCTTCAGTTGGCGCAAAACCGGTGCC TCCACAGGTCTTTAATTATTTAGAAGCGCTTAGCCTGGCAAGTAATCAAGGGAGCCAGTTCCTCAAACTCACCTCTCGCT CAGGCTTCAAATTGCTTCAGGTTCAAAACTACGCAGGGATGCTTTCAACACCTCACGGTTTCCAGCTTGAGATACTGCCC AAGGTTGGTAAAAACCTCACAGCGGCTAATGCACGTCAAACATTGCTGACGATGCTAAGCCATCTGCCTGGGTTCCGACA TATTCAAACCCAGCAAGCCACTCTTCAGGCTCAGCGTATGCCTTTGCTTGAGATTTTTATTAACCAGTTTTTGCATAGCG TCAGCCAATTGCTTAAACAGGGTTTACGCTCCGACTATGTGAGCAAGCAAGGTAATCTGGCTTTTATGAAGGGCAAGCTG ATGCTTTCTGCACAGCTGCGACATAACGCGGTGAATCGCCATAAGTTTTGTGTCGATTATGATGACTACATGCCTGATTG TGCAGCCAATCGGCTCTTACACTCCGCACTAGATAAGCTTCTTAGTCTGCAGCTGTCATCAGATAATCAACGCTGGCTTT ACGAACTGCGTTTTGCGTTTGACGGTATTCCACTTAGCCGGGATATTGAACGTGATATAAACAACTTACGCCTCGAGCGT GGTATGGCTCATTACAACGAGCCAATGGCATGGGCGCAATTGATCCTGAGGGGAATGAGCCCGAGTGAATCGCCACGGGT TTAA
Upstream 100 bases:
>100_bases GAGCTCAAAGATTTCGATCAAGAGATCTGGAATATTCCACAGGCTTATCGTTCAATTTATCAGCCCCAACAGACTCCCCT TGATGAGCAGGCAGTAAATC
Downstream 100 bases:
>100_bases CAGACACCTCAGAGTCATTTAAGATGGCTTAAAGAGAGGTGCCCATGAGCGGTAAGCGTTATCCCGAAGAGTTTAAAACT GAAGCAGTCAAACAGGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: 5-Methylcytosine Restriction System Component; McrBC 5-Methylcytosine Restriction System Component-Like; 5-Methylcytosine-Specific Restriction Protein C; McrBC 5-Methylcytosine Restriction Subunit McrC; 5-Methylcytosine Restriction System Component- Like Protein; 5-Methylcytosine Restriction System Component-Like Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MGEVISVFEYDLLGSGKAASVGAKPVPPQVFNYLEALSLASNQGSQFLKLTSRSGFKLLQVQNYAGMLSTPHGFQLEILP KVGKNLTAANARQTLLTMLSHLPGFRHIQTQQATLQAQRMPLLEIFINQFLHSVSQLLKQGLRSDYVSKQGNLAFMKGKL MLSAQLRHNAVNRHKFCVDYDDYMPDCAANRLLHSALDKLLSLQLSSDNQRWLYELRFAFDGIPLSRDIERDINNLRLER GMAHYNEPMAWAQLILRGMSPSESPRV
Sequences:
>Translated_267_residues MGEVISVFEYDLLGSGKAASVGAKPVPPQVFNYLEALSLASNQGSQFLKLTSRSGFKLLQVQNYAGMLSTPHGFQLEILP KVGKNLTAANARQTLLTMLSHLPGFRHIQTQQATLQAQRMPLLEIFINQFLHSVSQLLKQGLRSDYVSKQGNLAFMKGKL MLSAQLRHNAVNRHKFCVDYDDYMPDCAANRLLHSALDKLLSLQLSSDNQRWLYELRFAFDGIPLSRDIERDINNLRLER GMAHYNEPMAWAQLILRGMSPSESPRV >Mature_266_residues GEVISVFEYDLLGSGKAASVGAKPVPPQVFNYLEALSLASNQGSQFLKLTSRSGFKLLQVQNYAGMLSTPHGFQLEILPK VGKNLTAANARQTLLTMLSHLPGFRHIQTQQATLQAQRMPLLEIFINQFLHSVSQLLKQGLRSDYVSKQGNLAFMKGKLM LSAQLRHNAVNRHKFCVDYDDYMPDCAANRLLHSALDKLLSLQLSSDNQRWLYELRFAFDGIPLSRDIERDINNLRLERG MAHYNEPMAWAQLILRGMSPSESPRV
Specific function: Unknown
COG id: COG4268
COG function: function code V; McrBC 5-methylcytosine restriction system component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30074; Mature: 29943
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVISVFEYDLLGSGKAASVGAKPVPPQVFNYLEALSLASNQGSQFLKLTSRSGFKLLQ CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEE VQNYAGMLSTPHGFQLEILPKVGKNLTAANARQTLLTMLSHLPGFRHIQTQQATLQAQRM EECCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC PLLEIFINQFLHSVSQLLKQGLRSDYVSKQGNLAFMKGKLMLSAQLRHNAVNRHKFCVDY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEECH DDYMPDCAANRLLHSALDKLLSLQLSSDNQRWLYELRFAFDGIPLSRDIERDINNLRLER HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GMAHYNEPMAWAQLILRGMSPSESPRV HHHHCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GEVISVFEYDLLGSGKAASVGAKPVPPQVFNYLEALSLASNQGSQFLKLTSRSGFKLLQ CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEE VQNYAGMLSTPHGFQLEILPKVGKNLTAANARQTLLTMLSHLPGFRHIQTQQATLQAQRM EECCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC PLLEIFINQFLHSVSQLLKQGLRSDYVSKQGNLAFMKGKLMLSAQLRHNAVNRHKFCVDY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEECH DDYMPDCAANRLLHSALDKLLSLQLSSDNQRWLYELRFAFDGIPLSRDIERDINNLRLER HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GMAHYNEPMAWAQLILRGMSPSESPRV HHHHCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA