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The map label for this gene is ytfT [H]

Identifier: 157163704

GI number: 157163704

Start: 4487766

End: 4488791

Strand: Direct

Name: ytfT [H]

Synonym: EcHS_A4483

Alternate gene names: 157163704

Gene position: 4487766-4488791 (Clockwise)

Preceding gene: 157163703

Following gene: 157163705

Centisome position: 96.65

GC content: 57.99

Gene sequence:

>1026_bases
GTGATGCCTCAATCTCTCCCGGACACTACGCCGCCGAAAAGGCGCTTTCGCTGGCCAACGGGAATGCCGCAGCTGGCGGC
GCTATTGCTGGTGCTGCTGGTCGATAGCCTGGTAGCCCCGCATTTCTGGCAGGTGGTGCTTCAGGATGGGCGTTTGTTCG
GTAGCCCTATCGACATTCTTAACCGTGCAGCTCCCGTTGCGTTACTGGCGATTGGTATGACGCTGGTGATCGCCACCGGT
GGGATTGATCTCTCCGTAGGGGCGGTGATGGCTATCGCCGGAGCCACAACGGCTGCGATGACGGTCGCGGGATTCAGCCT
GCCGATTGTTTTGTTAAGCGCCCTGGGCACCGGCATCCTGGCGGGATTGTGGAACGGCATACTGGTAGCGATCCTCAAAA
TTCAGCCGTTTGTCGCCACCCTGATCCTGATGGTCGCCGGGCGCGGCGTGGCGCAACTGATCACCGCCGGGCAGATCGTC
ACGTTTAACTCGCCGGATCTCTCATGGTTTGGCAGCGGATCGCTGTTGTTCCTGCCAACGCCGGTCATTATCGCGGTGCT
GACGCTTCTCCTGTTCTGGCTGTTGACCCGCAAAACGGCGCTGGGGATGTTTATCGAAGCCGTTGGTATCAACATTCGGG
CGGCAAAAAATGCCGGGGTAAACACGCGGATCATCGTCATGCTCACCTACGTGTTGAGCGGGCTGTGTGCGGCGATTGCG
GGCATTATCGTGGCGGCGGATATTCGCGGTGCCGATGCCAATAACGCCGGGTTATGGCTGGAGCTGGACGCCATTCTTGC
GGTGGTGATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTGCTCTCAGTCGTGGGGGCGCTGATTATTCAGG
GGATGAACACCGGAATTTTACTTTCTGGCTTTCCGCCGGAGATGAACCAGGTCGTAAAAGCGGTGGTGGTGCTTTGTGTG
CTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCATGATAAAACGTAA

Upstream 100 bases:

>100_bases
GTGATTATCATGCGCGATCGCAAACAGGTGGCGGAGATCCCGCTGGCAGAGCTTTCCGTTCCGGCGATCATGAACGCCAT
TGCGGCGTAAGGAGAACAGT

Downstream 100 bases:

>100_bases
TTTGCCACTGATGATCACCATCGGCGTCTTTGTGCTGGGCTATTTCTACTGCCTGACGCAGTTTCCCGGTTTTGCTTCCA
CAAGAGTGATCTGCAATATC

Product: putative sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATG
GIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIV
TFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSHDKT

Sequences:

>Translated_341_residues
MMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATG
GIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIV
TFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSHDKT
>Mature_341_residues
MMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATG
GIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIV
TFNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSHDKT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=341, Percent_Identity=98.8269794721408, Blast_Score=647, Evalue=0.0,
Organism=Escherichia coli, GI1790191, Length=326, Percent_Identity=37.1165644171779, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1788896, Length=309, Percent_Identity=33.9805825242718, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1790524, Length=244, Percent_Identity=32.7868852459016, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI145693152, Length=263, Percent_Identity=36.1216730038023, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787793, Length=276, Percent_Identity=35.5072463768116, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI1789992, Length=330, Percent_Identity=30.3030303030303, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI87082395, Length=252, Percent_Identity=35.3174603174603, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788471, Length=281, Percent_Identity=30.2491103202847, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787794, Length=274, Percent_Identity=27.3722627737226, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35609; Mature: 35609

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDIL
CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGIL
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFNSPDLSWFGSGSLLFLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCEEEECH
PVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGIL
HHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
LSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSHDKT
EECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDIL
CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGIL
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFNSPDLSWFGSGSLLFLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCEEEECH
PVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGIL
HHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
LSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSHDKT
EECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]