Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157163682
Identifier: 157163682
GI number: 157163682
Start: 4465295
End: 4466227
Strand: Direct
Name: 157163682
Synonym: EcHS_A4461
Alternate gene names: NA
Gene position: 4465295-4466227 (Clockwise)
Preceding gene: 157163681
Following gene: 157163683
Centisome position: 96.16
GC content: 53.7
Gene sequence:
>933_bases ATGCCGCTGGATGTGCGCCGTCGTCCGCTGTGCGAGCAGATTGACGTCGTCTGGGGCGGGCGAGTGTTGCCCAATATCCG CAGTACTTTAAAGTCGGTACAGTATGACTTTATTCAGCTACAGCAGGGGGACCTGCGGGTACTGCAATCCGGGGGCAATA TTAGCAGTGATATGAAAGGACTAATTGATTATCCGTCGGACTGGATGTCACTCGCCGCGCAAAAACAGTATGACAGACTG AAATGGCGAGGTGCACATTATAATAATTTAATCAGACGTACCTCGGGCGGATACTGGTATGACGGCGAACTGACTTATTA TTATGAGGAAAGTCTGCACGGCCCGCTGGCCCTGCCGATGCAATTACCGTTGTATGAGCTGGATAGTAGCGTATACCTGC GTGAGGATGACTCGGTAACGGTGGCTGGCCTGTATCTGCCGGATATCCCAGATGCCAGCGCCCAACTGTTGTACCGGAGT GAACATATTCCCGAGGCTTGGCAGGGGCGGGTACGAACGAAGTATGTCAACGAGGCTGGGATACAAGAATATTACTGGGA AAGCGGGGCGTGGGCAAAATGCAATTGGAAACGTATACGGCGGGTGGCAAACCGATTTATCAATGTGCCGCCGGAGGGAT TTTTCCCACAGGGCATGCCGGAGGAGTTGTACAACTGGCCACAGCGCGAAGCGCAGTATGTTACAGACCGGCAGCGGATA GCGGCCTTTAGCGGTGAAGCTTGTCCTCATAGCGGGGAGTGGTCGATTTTTGTAGAAGGTAGACAAGCGACGGTGACACT GGAGCAGGGAGAGCAGATGCCAGAATGGACGGACAGGAAAATGGAGGGGGAGTATAAAAGAGGCGAGAAATTCCATGTGC TGTGGTCGCTGATGAACCGCCATGATGGCGGGTCGGTGTGGGTGGAAGCGTAG
Upstream 100 bases:
>100_bases GGAAAGAATAATGTCGCCGGAATATTATCGGCGTCGTTTTGAGGGCTGGCAGGAGTTTGTCGAGCTGTGCGAGCGACAGG TGGCAGAGTGGAGCAAGACC
Downstream 100 bases:
>100_bases CGGTAGCTGGATGTACACGTAAAAACCAGGGAATGGGTGATTTTATTCTGGCTTATACAGGAGCGATGAATAAGTAATTA TATTAATGAAAAAAATAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPLDVRRRPLCEQIDVVWGGRVLPNIRSTLKSVQYDFIQLQQGDLRVLQSGGNISSDMKGLIDYPSDWMSLAAQKQYDRL KWRGAHYNNLIRRTSGGYWYDGELTYYYEESLHGPLALPMQLPLYELDSSVYLREDDSVTVAGLYLPDIPDASAQLLYRS EHIPEAWQGRVRTKYVNEAGIQEYYWESGAWAKCNWKRIRRVANRFINVPPEGFFPQGMPEELYNWPQREAQYVTDRQRI AAFSGEACPHSGEWSIFVEGRQATVTLEQGEQMPEWTDRKMEGEYKRGEKFHVLWSLMNRHDGGSVWVEA
Sequences:
>Translated_310_residues MPLDVRRRPLCEQIDVVWGGRVLPNIRSTLKSVQYDFIQLQQGDLRVLQSGGNISSDMKGLIDYPSDWMSLAAQKQYDRL KWRGAHYNNLIRRTSGGYWYDGELTYYYEESLHGPLALPMQLPLYELDSSVYLREDDSVTVAGLYLPDIPDASAQLLYRS EHIPEAWQGRVRTKYVNEAGIQEYYWESGAWAKCNWKRIRRVANRFINVPPEGFFPQGMPEELYNWPQREAQYVTDRQRI AAFSGEACPHSGEWSIFVEGRQATVTLEQGEQMPEWTDRKMEGEYKRGEKFHVLWSLMNRHDGGSVWVEA >Mature_309_residues PLDVRRRPLCEQIDVVWGGRVLPNIRSTLKSVQYDFIQLQQGDLRVLQSGGNISSDMKGLIDYPSDWMSLAAQKQYDRLK WRGAHYNNLIRRTSGGYWYDGELTYYYEESLHGPLALPMQLPLYELDSSVYLREDDSVTVAGLYLPDIPDASAQLLYRSE HIPEAWQGRVRTKYVNEAGIQEYYWESGAWAKCNWKRIRRVANRFINVPPEGFFPQGMPEELYNWPQREAQYVTDRQRIA AFSGEACPHSGEWSIFVEGRQATVTLEQGEQMPEWTDRKMEGEYKRGEKFHVLWSLMNRHDGGSVWVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36116; Mature: 35985
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDVRRRPLCEQIDVVWGGRVLPNIRSTLKSVQYDFIQLQQGDLRVLQSGGNISSDMKG CCCCCCCCCHHHHHHHHCCCEECHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHH LIDYPSDWMSLAAQKQYDRLKWRGAHYNNLIRRTSGGYWYDGELTYYYEESLHGPLALPM HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEEEEEECCCCCCEECCC QLPLYELDSSVYLREDDSVTVAGLYLPDIPDASAQLLYRSEHIPEAWQGRVRTKYVNEAG CCCCEECCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHCCCHHEEHHCHHC IQEYYWESGAWAKCNWKRIRRVANRFINVPPEGFFPQGMPEELYNWPQREAQYVTDRQRI CHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH AAFSGEACPHSGEWSIFVEGRQATVTLEQGEQMPEWTDRKMEGEYKRGEKFHVLWSLMNR HHHCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHC HDGGSVWVEA CCCCEEEEEC >Mature Secondary Structure PLDVRRRPLCEQIDVVWGGRVLPNIRSTLKSVQYDFIQLQQGDLRVLQSGGNISSDMKG CCCCCCCCHHHHHHHHCCCEECHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHH LIDYPSDWMSLAAQKQYDRLKWRGAHYNNLIRRTSGGYWYDGELTYYYEESLHGPLALPM HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEEEEEECCCCCCEECCC QLPLYELDSSVYLREDDSVTVAGLYLPDIPDASAQLLYRSEHIPEAWQGRVRTKYVNEAG CCCCEECCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHCCCHHEEHHCHHC IQEYYWESGAWAKCNWKRIRRVANRFINVPPEGFFPQGMPEELYNWPQREAQYVTDRQRI CHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH AAFSGEACPHSGEWSIFVEGRQATVTLEQGEQMPEWTDRKMEGEYKRGEKFHVLWSLMNR HHHCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHC HDGGSVWVEA CCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA