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The map label for this gene is ytfA [H]

Identifier: 157163676

GI number: 157163676

Start: 4460540

End: 4461187

Strand: Direct

Name: ytfA [H]

Synonym: EcHS_A4455

Alternate gene names: 157163676

Gene position: 4460540-4461187 (Clockwise)

Preceding gene: 157163668

Following gene: 157163678

Centisome position: 96.06

GC content: 39.51

Gene sequence:

>648_bases
ATGTATCTTGATACCAGCAACGTACAGAGCCTGAAGGAAAAGCTGCTGTTATGCGCGGTTAATGAATTTGCCGAATATGG
TTATGAAGGGGCCAGGGTCGATAATATTGTTAAGGCTGCGGGGTGTAGTAAACAGACGGTTTATCATCACTTTGGTAATA
AAGAAAATTTATTTATTGAAGTACTGGAATATACCTGGAACGATATTCGACAAAAAGAAAAGGCCCTTGATTTCTCAGAT
CTTCCGCCACAAAAAGCTATTGAGAAAATTATTGATTTTACATGGGATTATTATATTGCTAACCCCTGGTTTTTAAAAAT
TGTGCATAGTGAAAATCAAAGTAAAGGTGTGCATTATGCAAAATCACAGCGTCTCTTAGAAATTAACCATGCGCACTTGC
AGTTAATGGAATCCTTATTGGATGAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATT
AATATTGCTGCGCTTGGGGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCATATCAGTATGGTTTCCCC
CCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGC
ACGAATAA

Upstream 100 bases:

>100_bases
TTTGATAACTTGATGAAAGTACAAGTTTTTATCCTTTTTACTGGAGCTTCTAATTAATCGGGTTAAGATAGTTATCTTGA
AGAGGTCGTGGGGAAGCGTT

Downstream 100 bases:

>100_bases
AACTGCCATCCGGCTGGCGGGTAAACAGGACCTGTTGATTATTCCCCGTATCAATGGTTAAGCCCGTCACCACGCCGCTG
GCGTTCTGGCGGATTTTCAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKENLFIEVLEYTWNDIRQKEKALDFSD
LPPQKAIEKIIDFTWDYYIANPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNI
NIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTAHE

Sequences:

>Translated_215_residues
MYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKENLFIEVLEYTWNDIRQKEKALDFSD
LPPQKAIEKIIDFTWDYYIANPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNI
NIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTAHE
>Mature_215_residues
MYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKENLFIEVLEYTWNDIRQKEKALDFSD
LPPQKAIEKIIDFTWDYYIANPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNI
NIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTAHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015893
- InterPro:   IPR011075 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24757; Mature: 24757

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKENLFIE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCHHHH
VLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWDYYIANPWFLKIVHSENQSKGVHYA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCHH
KSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVY
HCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCEEEEE
HISMVSPQALEARRKVIKETILSWLLVDPSSTAHE
EEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCCC
>Mature Secondary Structure
MYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKENLFIE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCHHHH
VLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWDYYIANPWFLKIVHSENQSKGVHYA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCHH
KSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVY
HCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCEEEEE
HISMVSPQALEARRKVIKETILSWLLVDPSSTAHE
EEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]