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The map label for this gene is yibJ [H]

Identifier: 157163074

GI number: 157163074

Start: 3793752

End: 3794696

Strand: Direct

Name: yibJ [H]

Synonym: EcHS_A3802

Alternate gene names: 157163074

Gene position: 3793752-3794696 (Clockwise)

Preceding gene: 157163073

Following gene: 157163077

Centisome position: 81.7

GC content: 47.94

Gene sequence:

>945_bases
GTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTG
CGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCG
ACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAAC
CTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCGGGTCAGCAGTATGATGAGGAGTCCGGCCT
GTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGAT
GGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAA
AGTGATCTTATCCATTCTGTAGCTGATGAGATTAATATCCCAGGCGTTTTCACAATCGGGGGGCATGGTACCCCCACATC
TATTGAATCCGCAACGCGCAGTATCATGACAGCTAAAGATCTAGCATATCTAATTAAATTTGATGGGAATTATAAAGATG
GGATGACAGTTTGGTTATTTTCTTGTAATACAGGTAAAGGACAAAATTCATTTGCTAGCCAATTAGCTAAAGAGTTACAT
ACAAATGTAATAGGACCTGACACGCTATGGACGTGGTGGGGGCGAGGAACTAATGGTAAGTTAAAAATGGATACAGTGCT
AACAGCACCAACGAACCTTAATTCAAATAAGGATCTAATGGCTATAACAACAAAAGACCTTGGTAATTGGATAACATATG
GGCCATCTGGGCACCCCATTTCTAATATGCAAGGTACGCCAGAAAAACCCAGTGATATAAGATAG

Upstream 100 bases:

>100_bases
ACAAGTTTGATGACAATGAAATTATAACTTCCGCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGT
GGGGGATTCCCGCCGGCACG

Downstream 100 bases:

>100_bases
GTTGTAGATGTATGAAAGCATGCTTGTTACTATTTTTTTATTTTTCTCTTATTGGTCAATTGCATGGTGCTGATGTGAAA
ATAAAAGAAAACGAAAGTGT

Product: Rhs family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGN
LLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPE
SDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFASQLAKELH
TNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPSGHPISNMQGTPEKPSDIR

Sequences:

>Translated_314_residues
MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGN
LLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPE
SDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFASQLAKELH
TNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPSGHPISNMQGTPEKPSDIR
>Mature_314_residues
MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGN
LLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPE
SDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFASQLAKELH
TNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPSGHPISNMQGTPEKPSDIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1790020, Length=152, Percent_Identity=92.7631578947368, Blast_Score=306, Evalue=9e-85,
Organism=Escherichia coli, GI48994942, Length=152, Percent_Identity=91.4473684210526, Blast_Score=302, Evalue=2e-83,
Organism=Escherichia coli, GI1786917, Length=152, Percent_Identity=91.4473684210526, Blast_Score=301, Evalue=4e-83,
Organism=Escherichia coli, GI1786706, Length=153, Percent_Identity=77.124183006536, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385 [H]

Pfam domain/function: PF03527 RHS [H]

EC number: NA

Molecular weight: Translated: 35390; Mature: 35390

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCE
ALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG
EEEECCCCEEEHHCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCC
RYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIG
CEEECCCCCCCCCCCEEECCCCCEEECCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEC
GHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFASQLAKELH
CCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
TNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPSGHPI
HCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCC
SNMQGTPEKPSDIR
CCCCCCCCCCCCCC
>Mature Secondary Structure
MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCE
ALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG
EEEECCCCEEEHHCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCC
RYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIG
CEEECCCCCCCCCCCEEECCCCCEEECCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEC
GHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFASQLAKELH
CCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
TNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPSGHPI
HCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCC
SNMQGTPEKPSDIR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8041620; 9278503 [H]