| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is yiaL [H]
Identifier: 157163054
GI number: 157163054
Start: 3773085
End: 3773513
Strand: Direct
Name: yiaL [H]
Synonym: EcHS_A3780
Alternate gene names: 157163054
Gene position: 3773085-3773513 (Clockwise)
Preceding gene: 157163053
Following gene: 157163055
Centisome position: 81.25
GC content: 44.76
Gene sequence:
>429_bases TTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAAT CGACGGCAAAAATATTTATGCGCAAATTATCGATTTAACCACACGCGAAGCGGTGGAAAACCGTCCGGAAGTGCATCGTC GGTATATCGATATTCAGTTTCTGGCGTGGGGTGAAGAGAAAATCGGCATTGCTATTGATACGGGAAATAATAAAGTCAGC GAATCACTATTAGAGCAGCGCGATATTATTTTTTATCATGACAGTGAACATGAATCATTTATAGAAATGATACCGGGCAG CTACGCAATTTTCTTTCCGCAGGATGTTCACCGACCAGGTTGTATTTTGCAAACAGCCTCTGAGATACGAAAAATTGTGG TTAAAGTCGCATTAACGGCGCTGAATTAA
Upstream 100 bases:
>100_bases ACGGTATTACCGTTGATGACAGCGTGTGGGCCAAAATCCAGGCGTTATAAGGAGATAAGTCATAATTTTTGGACATATCG CGCAGCCCAATCCGTGCCGT
Downstream 100 bases:
>100_bases TCGAATAATCGTCTACGCCAGAACGCCTGGGTAATGTTATTGCTCTAACTATATTAATAATTCAGGTTGCTGCACATGCA ACATGAATTATGACAGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPAAIEKALDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVS ESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCILQTASEIRKIVVKVALTALN
Sequences:
>Translated_142_residues MPAAIEKALDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVS ESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCILQTASEIRKIVVKVALTALN >Mature_141_residues PAAIEKALDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSE SLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCILQTASEIRKIVVKVALTALN
Specific function: Unknown
COG id: COG2731
COG function: function code G; Beta-galactosidase, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yhcH/yiaL/yjgK family [H]
Homologues:
Organism=Escherichia coli, GI1790001, Length=142, Percent_Identity=96.4788732394366, Blast_Score=283, Evalue=3e-78, Organism=Escherichia coli, GI1789615, Length=126, Percent_Identity=32.5396825396825, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI87082398, Length=139, Percent_Identity=25.1798561151079, Blast_Score=63, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004375 [H]
Pfam domain/function: PF04074 DUF386 [H]
EC number: NA
Molecular weight: Translated: 16085; Mature: 15953
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAIEKALDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQF CCHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHCCHHHHHHEEEEEE LAWGEEKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPG EEECCCEEEEEEECCCCHHHHHHHHHCCEEEEECCCCHHHHHHCCCCEEEECCCCCCCCC CILQTASEIRKIVVKVALTALN HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PAAIEKALDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQF CHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHCCHHHHHHEEEEEE LAWGEEKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPG EEECCCEEEEEEECCCCHHHHHHHHHCCEEEEECCCCHHHHHHCCCCEEEECCCCCCCCC CILQTASEIRKIVVKVALTALN HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]