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The map label for this gene is yhiR

Identifier: 157162975

GI number: 157162975

Start: 3687896

End: 3688738

Strand: Direct

Name: yhiR

Synonym: EcHS_A3699

Alternate gene names: 157162975

Gene position: 3687896-3688738 (Clockwise)

Preceding gene: 157162972

Following gene: 157162976

Centisome position: 79.42

GC content: 54.45

Gene sequence:

>843_bases
ATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCGACGTCCTTAAACATACCGTTCAGAGCCTGATCATCGA
GTCGCTGAAAGAGAAAGATAAACCGTTTCTCTATCTCGACACCCACGCAGGGGCCGGGCGTTATCAGTTAGGCAGCGAAC
ATGCCGAGCGTACCGGCGAATATCTCGAAGGCATCGCCCGTATCTGGCAGCAGGACGATTTGCCCGCAGAACTGGAGGCG
TACATCAATGTGGTAAAACACTTCAACCGTAGCGGTCAGTTGCGTTACTACCCCGGTTCGCCGTTGATTGCTCGCCTGCT
ACTGCGTGAACAGGACAGCCTGCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAG
ATAGCCGTGCGCGTGTCGAAAAAGCCGACGGTTTCCAGCAGCTTAAGGCCAAACTGCCGCCGGTTTCCCGCCGTGGTTTA
ATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTT
CGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAGCAAATTAAGCGCATGATCCACGATCTGGAAGCGA
CCGGTATTCGCAAAATTCTGCAAATTGAACTGGCGGTACTGCCAGACAGCGATCGCCGTGGCATGACCGCTTCCGGCATG
ATTGTGATTAACCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGC
AGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAA

Upstream 100 bases:

>100_bases
ACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTAC
TTACCGGAACACCTTTACCC

Downstream 100 bases:

>100_bases
TTGCAGCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTTTGTCATGACTAAA
CACTATGATTACATCGCCAT

Product: DNA utilization protein YhiR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEA
YINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE

Sequences:

>Translated_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEA
YINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
>Mature_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEA
YINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=100, Blast_Score=575, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHIR_ECOLI (P37634)

Other databases:

- EMBL:   U00039
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S47719
- RefSeq:   AP_004294.1
- RefSeq:   NP_417956.1
- ProteinModelPortal:   P37634
- SMR:   P37634
- DIP:   DIP-12371N
- IntAct:   P37634
- MINT:   MINT-1219143
- STRING:   P37634
- EnsemblBacteria:   EBESCT00000001255
- EnsemblBacteria:   EBESCT00000017771
- GeneID:   948012
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3466
- KEGG:   eco:b3499
- EchoBASE:   EB2146
- EcoGene:   EG12234
- eggNOG:   COG2961
- GeneTree:   EBGT00050000011128
- HOGENOM:   HBG289887
- OMA:   FADVLKH
- ProtClustDB:   CLSK870411
- BioCyc:   EcoCyc:EG12234-MONOMER
- Genevestigator:   P37634
- InterPro:   IPR002052
- InterPro:   IPR007473

Pfam domain/function: PF04378 DUF519

EC number: NA

Molecular weight: Translated: 31942; Mature: 31942

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCEEEECC
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH
AEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCE
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
EEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCEEEECC
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH
AEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCE
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
EEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503