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The map label for this gene is hofM [H]

Identifier: 157162870

GI number: 157162870

Start: 3566329

End: 3567108

Strand: Reverse

Name: hofM [H]

Synonym: EcHS_A3590

Alternate gene names: 157162870

Gene position: 3567108-3566329 (Counterclockwise)

Preceding gene: 157162872

Following gene: 157162869

Centisome position: 76.82

GC content: 57.82

Gene sequence:

>780_bases
ATGGCATTTAAGATCTGGCAAATTGGTTTGCATTTACAACAGCAAGAAGCGTTAGCGGTTGCGATCGTGCGGGACGCAAA
AGAATGCTTTTTGCAACGCTGGTGGCGGTTGCCGTTGGCGCACGACATTATCAAAGATGGGCGGATTGTTGATGCGCAGC
GGCTGGCTAAAACGTTGTTGCCGTGGAGTCGCGAACTGCCGCAGCGCCATCACATCATGTTGGCGTTTCCCGCCAGTCGC
ACATTACAGCGGTCATTTCCGCGCCCGTCGATGTCCCTCGGTGAGCGGGAGCAAATGGCCTGGCTGTCTGGGACGATGGC
CCGCGAGCTGGATATGGATCCGGACTCCCTGCGCTTCGATTACAGCGAAGACTCACTCAGCCCCGCTTATAACGTGACTG
CCGCGCAAAGCAAAGAGCTGGCAACGCTACTTACTCTGGCAGAAAGGTTGCGTGTTCATGTGAGCGCGATCACCCCGGAT
GCCAGTGCATTACAGCAATTCCTGCCTTTTTTACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCT
GTGGGCGACGCGCTATAGCTGGGGGCGCAAACTGGCGGTAGGGATGACTAGCGCGAAGGAGCTGGCGGCAGCGTTATCCG
TTGATCCCGACAGCGTCGCGATATGTGGCGAAGGCGGATTTGATCCCTGGGAGGCCGTTTCTGTTCGTCAGCCGCCGCTA
CCGCCGCCTGGTGGAGACTTTGCCATCGCGCTGGGGCTGGCGCTTGGGAAGGCGTACTGA

Upstream 100 bases:

>100_bases
TTCATTTGGGCAGTTTATAAACAAACGCGCGGTAGTATAAAGGCAAGCCAGACGCATTGATATACCCGTCAGAGTGACGG
GTGATAAGGAGATCATCACA

Downstream 100 bases:

>100_bases
TGAACCCGCCAATTAATTTTTTGCCCTGGCGACAGCAACGCCGGACCGCTTTTCTGCGTTTCTGGTTGCTGATGTTCGTT
GCGCCTCTGCTGCTGGCCGT

Product: HofM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MAFKIWQIGLHLQQQEALAVAIVRDAKECFLQRWWRLPLAHDIIKDGRIVDAQRLAKTLLPWSRELPQRHHIMLAFPASR
TLQRSFPRPSMSLGEREQMAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
ASALQQFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPDSVAICGEGGFDPWEAVSVRQPPL
PPPGGDFAIALGLALGKAY

Sequences:

>Translated_259_residues
MAFKIWQIGLHLQQQEALAVAIVRDAKECFLQRWWRLPLAHDIIKDGRIVDAQRLAKTLLPWSRELPQRHHIMLAFPASR
TLQRSFPRPSMSLGEREQMAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
ASALQQFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPDSVAICGEGGFDPWEAVSVRQPPL
PPPGGDFAIALGLALGKAY
>Mature_258_residues
AFKIWQIGLHLQQQEALAVAIVRDAKECFLQRWWRLPLAHDIIKDGRIVDAQRLAKTLLPWSRELPQRHHIMLAFPASRT
LQRSFPRPSMSLGEREQMAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDA
SALQQFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPDSVAICGEGGFDPWEAVSVRQPPLP
PPGGDFAIALGLALGKAY

Specific function: Required for the use of extracellular DNA as a nutrient [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082257, Length=259, Percent_Identity=96.9111969111969, Blast_Score=510, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29054; Mature: 28922

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFKIWQIGLHLQQQEALAVAIVRDAKECFLQRWWRLPLAHDIIKDGRIVDAQRLAKTLL
CCEEEEEECCEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECHHHHHHHHC
PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQMAWLSGTMARELDMDPDSLRFD
CHHHCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC
YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQQFLPFLPSHQQCLAW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHEEECCCHHHHHHHHHCCCCCCHHEEE
RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPDSVAICGEGGFDPWEAVSVRQPPL
ECCCCEEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCCC
PPPGGDFAIALGLALGKAY
CCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AFKIWQIGLHLQQQEALAVAIVRDAKECFLQRWWRLPLAHDIIKDGRIVDAQRLAKTLL
CEEEEEECCEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECHHHHHHHHC
PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQMAWLSGTMARELDMDPDSLRFD
CHHHCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC
YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQQFLPFLPSHQQCLAW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHEEECCCHHHHHHHHHCCCCCCHHEEE
RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPDSVAICGEGGFDPWEAVSVRQPPL
ECCCCEEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCCC
PPPGGDFAIALGLALGKAY
CCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]