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The map label for this gene is hofO [H]

Identifier: 157162868

GI number: 157162868

Start: 3565366

End: 3565806

Strand: Reverse

Name: hofO [H]

Synonym: EcHS_A3588

Alternate gene names: 157162868

Gene position: 3565806-3565366 (Counterclockwise)

Preceding gene: 157162869

Following gene: 157162867

Centisome position: 76.79

GC content: 54.42

Gene sequence:

>441_bases
ATGAACATGTTCTTTGACTGGTGGTTCGCCACATCACCCCGTCTCCGCCAGCTTTGCTGGGCAGTCTGGTTGCTGATGTT
AGTTACGCTCATTTTTCTGTCATCGACACACCAGGAAGAGAGCGACGCATTAATTCGACTACGGGCAAGTCATCACCAGC
AGTGGGCCGCACTGTATCGCCTGGTAGACACCACTCCCTTCAGCGAGGAAAAAACGCTGCCCTTTTCGCCACTGGATTTT
CAGTTATCCGGCGCGCAACTGGTTTCCTGGCATCCATCCGCGCAGGGAGGCGAGTTGGCGTTGAAAACGCTGTGGGAAGC
AGTGCCGTCGGCATTTACACGGCTGGCAGAGCGCAACGTCAGCGTGAGCCGTTTTTCGTTAAGCGTGGAAGGTGATGATC
TTTTGTTCACGCTACAACTGGAGACGCCGCATGAGGGTTAA

Upstream 100 bases:

>100_bases
CGCCAGGATGCTTCTTTTCATCTCAATCAGCGGGGGGCCACGCAGCAGGATGCGCAGGGACGCTGGCAATTTGAGTATCA
GTTAACAAGGAAGGTTAGCG

Downstream 100 bases:

>100_bases
ACGCTGGTTGTTGGCAGGTGTTGCATTGTGCCTTTTAACCGGTATGCGTGACCCTTTTAAACCGCCGGAAGATCTATGCC
GGATTAGCGAACTTAGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNMFFDWWFATSPRLRQLCWAVWLLMLVTLIFLSSTHQEESDALIRLRASHHQQWAALYRLVDTTPFSEEKTLPFSPLDF
QLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG

Sequences:

>Translated_146_residues
MNMFFDWWFATSPRLRQLCWAVWLLMLVTLIFLSSTHQEESDALIRLRASHHQQWAALYRLVDTTPFSEEKTLPFSPLDF
QLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG
>Mature_146_residues
MNMFFDWWFATSPRLRQLCWAVWLLMLVTLIFLSSTHQEESDALIRLRASHHQQWAALYRLVDTTPFSEEKTLPFSPLDF
QLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG

Specific function: Required for the use of extracellular DNA as a nutrient [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789795, Length=146, Percent_Identity=97.2602739726027, Blast_Score=286, Evalue=3e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16750; Mature: 16750

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMFFDWWFATSPRLRQLCWAVWLLMLVTLIFLSSTHQEESDALIRLRASHHQQWAALYR
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHHHHH
LVDTTPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNV
HHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SVSRFSLSVEGDDLLFTLQLETPHEG
CEEEEEEEECCCCEEEEEEECCCCCC
>Mature Secondary Structure
MNMFFDWWFATSPRLRQLCWAVWLLMLVTLIFLSSTHQEESDALIRLRASHHQQWAALYR
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHHHHH
LVDTTPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNV
HHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SVSRFSLSVEGDDLLFTLQLETPHEG
CEEEEEEEECCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]