| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is chiA [H]
Identifier: 157162813
GI number: 157162813
Start: 3511503
End: 3514196
Strand: Reverse
Name: chiA [H]
Synonym: EcHS_A3533
Alternate gene names: 157162813
Gene position: 3514196-3511503 (Counterclockwise)
Preceding gene: 157162814
Following gene: 157162812
Centisome position: 75.68
GC content: 50.26
Gene sequence:
>2694_bases ATGAAATTAAATATATTTACTAAATCTATGATTGGTATGGGGCTGGTGTGTTCCGCTCTGCCAGCATTGGCAATGGAAGC ATGGAATAACCAACAAGGTGGTAATAAATATCAGGTTATTTTCGATGGCAAAATTTATGAAAATGCCTGGTGGGTTTCTT CTACAAATTGCCCGGGAAAAGCGAAAGCAAATGATGCAACTAACCCGTGGCGTTTAAAGCGTACCGCAACAGCTGCTGAA ATTAGTCAGTTTGGCAATACACTTTCCTGCGAAAAGAGCGGCAGCTCATCTTCTTCAAATTCAAATACGCCTGCATCCAA TACGCCGGCTAATGGCGGTTCGGCTACACCAGCACAGGGCACTGTTCCGTCTAATTCTTCTGTAGTTGCCTGGAATAAAC AGCAGGGCGGTCAGACCTGGTATGTCGTCTTTAATGGTGCGGTATATAAAAATGCCTGGTGGGTAGCCTCTTCTAACTGT CCGGGTGATGCGAAAGGCAATGATGCCAGCAACCCATGGCGTTATGTTCGTGCCGCTACGGCAACGGAAATCTCAGAAAC CAGTAATCCACAGTCCTGTACTTCAGCACCACAGCCTGCACCGGATGTGAAACCGGCACCGGACGTTAAACCGGCTCCTG ATGTTCAGCCAGCCCCAGCTGATAAGTCAAACGACAACTATGCTGTAGTAGCCTGGAAAGGTCAGGAAGGTTCTTCTACA TGGTACGTTATCTATAACGGCGGCATTTATAAGAACGCCTGGTGGGTAGGCGCGGCAAATTGCCCAGGCGATGCGAAAGA AAACGATGCCAGTAACCCATGGCGTTATGTTCGCGCGGCAACGGCAACAGAAATCAGCCAGTATGGTAACCCTGGCTCCT GTTCCGTTAAGCCGGATAATAATGGCGGTGCTGTGACTCCGGTTGATCCAACTCCGGAAACACCGGTGACCCCAACTCCG GATAACAGCGAGCCATCAACACCAGCGGATAGCGGTAACGATTACTCATTGCAAGCGTGGAGCGGCCAGGAAGGTAGCGA AATTTACCATGTTATTTTCAATGGTAATGTTTACAAGAACGCCTGGTGGGTTGGGTCTAAAGATTGCCCACGGGGTACCA GCGCTGAAAACTCCAATAACCCATGGCGTCTCGAGCGTACAGCTACCGCTGCGGAATTGAGTCAGTACGGTAACCCGACT ACCTGTGAAATTGATAACGGCGGCGTCATTGTTGCGGATGGTTTCCAGGCCAGCAAAGCGTACAGCGCGGACAGCATCGT AGATTATAACGATGCACATTATAAAACTTCTGTCGATCAAGACGCATGGGGCTTTGTCCCGGGCGGCGATAACCCGTGGA AGAAATACGAACCGGCGAAAGCATGGTCCGCATCCACTGTGTACGTGAAAGGTGATCGCGTTGTTGTTGATGGGCAGGCT TATGAAGCGCTGTTCTGGACGCAAAGTGACAACCCTGCTCTGGTTGCGAACCAAAACGCCACCGGTAGCAATAGCCGCCC GTGGAAGCCGTTAGGTAAGGCTCAGAGCTATAGCAACGAAGAGCTGAATAATGCGCCGCAGTTTAATCCAGAAACGCTTT ATGCCAGCGATACGCTGATTCGCTTTAACGGTGTGAACTACATTTCTCAGAGTAAAGTGCAGAAAGTTTCTCCTTCTGAC AGCAACCCGTGGCGTGTTTTTGTTGACTGGACCGGAACCAAAGAACGTGTAGGTACGCCGAAGAAAGCATGGCCGAAACA CGTTTATGCACCGTATGTTGACTTTACGCTGAATACGATCCCGGATTTGGCTGCGCTGGCTAAGAATCATAACGTCAACC ACTTCACGCTGGCGTTTGTGGTGAGTAAAGATGCGAACACCTGTCTGCCGACATGGGGTACCGCTTATGGTATGCAGAAT TACGCTCAGTACAGCAAAATCAAAGCTCTGCGTGAGGCTGGCGGCGATGTGATGCTGTCTATCGGTGGTGCTAACAACGC TCCGCTGGCTGCTTCCTGTAAGAACGTAGACGATCTGATGCAGCATTATTATGACATCGTTGATAACCTGAACCTCAGAG TCCTGGACTTCGATATCGAAGGCACCTGGGTTGCGGATCAGGCATCTATTGAACGTCGTAACCTTGCTGTGAAGAAAGTG CAGGATAAATGGAAGTCAGAAGGCAAAGATATTGCTATCTGGTACACCTTGCCAATTCTACCGACTGGCCTGACGCCGGA AGGGATGAATGTCCTGAGCGATGCCAAAGCGAAAGGTGTTGAGCTGGCGGGTGTGAACGTGATGACAATGGACTACGGTA ACGCGATTTGTCAGTCTGCAAATACCGAAGGCCAGAACATTCACGGTAAGTGTGCAACGTCTGCGATTGCCAACCTGCAT TCACAATTGAAAGGCCTCCATCCCAACAAGAGCGATGCAGAAATTGACGCTATGATGGGTACCACGCCGATGGTTGGCGT GAACGACGTTCAGGGCGAGGTGTTCTATCTCTCTGATGCTCGTCTGGTCATGCAGGATGCGCAGAAGCGTAATCTCGGTA TGGTTGGTATCTGGTCAATCGCGCGCGACCTGCCGGGCGGCACTAACCTGTCTCCGGAATTCCACGGCCTGACTAAAGAA CAGGCACCGAAGTACGCATTTAGCGAAATCTTCGCGCCGTTTACTAAGCAATAA
Upstream 100 bases:
>100_bases TAATGCCGCACTTTAATTCATATTGAAGGGTTCTCGTAAAACGTAAATAATTCCTGCGTAGGACTTTTGTTTTGCAGTTT TTACGTCACAAGGGATTATA
Downstream 100 bases:
>100_bases ATGTGTTGGCGATACCTTCCGGTATCGCCGCATTTTTTGTCAATGGGTTACTTTTGGTAGCCCATTATTTTTATTCATAT TTCTATTCTTTGCTTAAAAA
Product: bifunctional chitinase/lysozyme
Products: NA
Alternate protein names: Chitinase; Lysozyme [H]
Number of amino acids: Translated: 897; Mature: 897
Protein sequence:
>897_residues MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGKIYENAWWVSSTNCPGKAKANDATNPWRLKRTATAAE ISQFGNTLSCEKSGSSSSSNSNTPASNTPANGGSATPAQGTVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNC PGDAKGNDASNPWRYVRAATATEISETSNPQSCTSAPQPAPDVKPAPDVKPAPDVQPAPADKSNDNYAVVAWKGQEGSST WYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRYVRAATATEISQYGNPGSCSVKPDNNGGAVTPVDPTPETPVTPTP DNSEPSTPADSGNDYSLQAWSGQEGSEIYHVIFNGNVYKNAWWVGSKDCPRGTSAENSNNPWRLERTATAAELSQYGNPT TCEIDNGGVIVADGFQASKAYSADSIVDYNDAHYKTSVDQDAWGFVPGGDNPWKKYEPAKAWSASTVYVKGDRVVVDGQA YEALFWTQSDNPALVANQNATGSNSRPWKPLGKAQSYSNEELNNAPQFNPETLYASDTLIRFNGVNYISQSKVQKVSPSD SNPWRVFVDWTGTKERVGTPKKAWPKHVYAPYVDFTLNTIPDLAALAKNHNVNHFTLAFVVSKDANTCLPTWGTAYGMQN YAQYSKIKALREAGGDVMLSIGGANNAPLAASCKNVDDLMQHYYDIVDNLNLRVLDFDIEGTWVADQASIERRNLAVKKV QDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAICQSANTEGQNIHGKCATSAIANLH SQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRNLGMVGIWSIARDLPGGTNLSPEFHGLTKE QAPKYAFSEIFAPFTKQ
Sequences:
>Translated_897_residues MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGKIYENAWWVSSTNCPGKAKANDATNPWRLKRTATAAE ISQFGNTLSCEKSGSSSSSNSNTPASNTPANGGSATPAQGTVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNC PGDAKGNDASNPWRYVRAATATEISETSNPQSCTSAPQPAPDVKPAPDVKPAPDVQPAPADKSNDNYAVVAWKGQEGSST WYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRYVRAATATEISQYGNPGSCSVKPDNNGGAVTPVDPTPETPVTPTP DNSEPSTPADSGNDYSLQAWSGQEGSEIYHVIFNGNVYKNAWWVGSKDCPRGTSAENSNNPWRLERTATAAELSQYGNPT TCEIDNGGVIVADGFQASKAYSADSIVDYNDAHYKTSVDQDAWGFVPGGDNPWKKYEPAKAWSASTVYVKGDRVVVDGQA YEALFWTQSDNPALVANQNATGSNSRPWKPLGKAQSYSNEELNNAPQFNPETLYASDTLIRFNGVNYISQSKVQKVSPSD SNPWRVFVDWTGTKERVGTPKKAWPKHVYAPYVDFTLNTIPDLAALAKNHNVNHFTLAFVVSKDANTCLPTWGTAYGMQN YAQYSKIKALREAGGDVMLSIGGANNAPLAASCKNVDDLMQHYYDIVDNLNLRVLDFDIEGTWVADQASIERRNLAVKKV QDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAICQSANTEGQNIHGKCATSAIANLH SQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRNLGMVGIWSIARDLPGGTNLSPEFHGLTKE QAPKYAFSEIFAPFTKQ >Mature_897_residues MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGKIYENAWWVSSTNCPGKAKANDATNPWRLKRTATAAE ISQFGNTLSCEKSGSSSSSNSNTPASNTPANGGSATPAQGTVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNC PGDAKGNDASNPWRYVRAATATEISETSNPQSCTSAPQPAPDVKPAPDVKPAPDVQPAPADKSNDNYAVVAWKGQEGSST WYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRYVRAATATEISQYGNPGSCSVKPDNNGGAVTPVDPTPETPVTPTP DNSEPSTPADSGNDYSLQAWSGQEGSEIYHVIFNGNVYKNAWWVGSKDCPRGTSAENSNNPWRLERTATAAELSQYGNPT TCEIDNGGVIVADGFQASKAYSADSIVDYNDAHYKTSVDQDAWGFVPGGDNPWKKYEPAKAWSASTVYVKGDRVVVDGQA YEALFWTQSDNPALVANQNATGSNSRPWKPLGKAQSYSNEELNNAPQFNPETLYASDTLIRFNGVNYISQSKVQKVSPSD SNPWRVFVDWTGTKERVGTPKKAWPKHVYAPYVDFTLNTIPDLAALAKNHNVNHFTLAFVVSKDANTCLPTWGTAYGMQN YAQYSKIKALREAGGDVMLSIGGANNAPLAASCKNVDDLMQHYYDIVDNLNLRVLDFDIEGTWVADQASIERRNLAVKKV QDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAICQSANTEGQNIHGKCATSAIANLH SQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRNLGMVGIWSIARDLPGGTNLSPEFHGLTKE QAPKYAFSEIFAPFTKQ
Specific function: Bifunctional enzyme with lysozyme/chitinase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 chitin-binding type-3 domains [H]
Homologues:
Organism=Escherichia coli, GI1789736, Length=897, Percent_Identity=99.5540691192865, Blast_Score=1836, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02839 CBM_5_12 [H]
EC number: =3.2.1.14; =3.2.1.17 [H]
Molecular weight: Translated: 96998; Mature: 96998
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGKIYENAWWVSSTNCPGK CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCEEEEECCCCCCC AKANDATNPWRLKRTATAAEISQFGNTLSCEKSGSSSSSNSNTPASNTPANGGSATPAQG CCCCCCCCCEEEEHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNCPGDAKGNDASNPWRYVRAAT CCCCCCCEEEEECCCCCCEEEEEECCEEEECEEEEECCCCCCCCCCCCCCCCHHEEEEHH ATEISETSNPQSCTSAPQPAPDVKPAPDVKPAPDVQPAPADKSNDNYAVVAWKGQEGSST HHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE WYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRYVRAATATEISQYGNPGSCSVKPDN EEEEECCCEEECEEEEECCCCCCCCCCCCCCCCHHEEEHHHHHHHHHCCCCCCEEECCCC NGGAVTPVDPTPETPVTPTPDNSEPSTPADSGNDYSLQAWSGQEGSEIYHVIFNGNVYKN CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEC AWWVGSKDCPRGTSAENSNNPWRLERTATAAELSQYGNPTTCEIDNGGVIVADGFQASKA EEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCC YSADSIVDYNDAHYKTSVDQDAWGFVPGGDNPWKKYEPAKAWSASTVYVKGDRVVVDGQA CCCCCEECCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCEEEECCCC YEALFWTQSDNPALVANQNATGSNSRPWKPLGKAQSYSNEELNNAPQFNPETLYASDTLI EEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCEEE RFNGVNYISQSKVQKVSPSDSNPWRVFVDWTGTKERVGTPKKAWPKHVYAPYVDFTLNTI EECCCCHHHHHHHHCCCCCCCCCEEEEEEECCCHHHCCCCHHHCCCCCCCCEEEEEHHCC PDLAALAKNHNVNHFTLAFVVSKDANTCLPTWGTAYGMQNYAQYSKIKALREAGGDVMLS HHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE IGGANNAPLAASCKNVDDLMQHYYDIVDNLNLRVLDFDIEGTWVADQASIERRNLAVKKV ECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEECHHHHHHHHHHHHHH QDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAICQSA HHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCEEEECEEEEEECCCCHHHHCC NTEGQNIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCCCEEEEEECC RLVMQDAQKRNLGMVGIWSIARDLPGGTNLSPEFHGLTKEQAPKYAFSEIFAPFTKQ HHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGKIYENAWWVSSTNCPGK CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCEEEEECCCCCCC AKANDATNPWRLKRTATAAEISQFGNTLSCEKSGSSSSSNSNTPASNTPANGGSATPAQG CCCCCCCCCEEEEHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNCPGDAKGNDASNPWRYVRAAT CCCCCCCEEEEECCCCCCEEEEEECCEEEECEEEEECCCCCCCCCCCCCCCCHHEEEEHH ATEISETSNPQSCTSAPQPAPDVKPAPDVKPAPDVQPAPADKSNDNYAVVAWKGQEGSST HHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE WYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRYVRAATATEISQYGNPGSCSVKPDN EEEEECCCEEECEEEEECCCCCCCCCCCCCCCCHHEEEHHHHHHHHHCCCCCCEEECCCC NGGAVTPVDPTPETPVTPTPDNSEPSTPADSGNDYSLQAWSGQEGSEIYHVIFNGNVYKN CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEC AWWVGSKDCPRGTSAENSNNPWRLERTATAAELSQYGNPTTCEIDNGGVIVADGFQASKA EEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCC YSADSIVDYNDAHYKTSVDQDAWGFVPGGDNPWKKYEPAKAWSASTVYVKGDRVVVDGQA CCCCCEECCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCEEEECCCC YEALFWTQSDNPALVANQNATGSNSRPWKPLGKAQSYSNEELNNAPQFNPETLYASDTLI EEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCEEE RFNGVNYISQSKVQKVSPSDSNPWRVFVDWTGTKERVGTPKKAWPKHVYAPYVDFTLNTI EECCCCHHHHHHHHCCCCCCCCCEEEEEEECCCHHHCCCCHHHCCCCCCCCEEEEEHHCC PDLAALAKNHNVNHFTLAFVVSKDANTCLPTWGTAYGMQNYAQYSKIKALREAGGDVMLS HHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE IGGANNAPLAASCKNVDDLMQHYYDIVDNLNLRVLDFDIEGTWVADQASIERRNLAVKKV ECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEECHHHHHHHHHHHHHH QDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAICQSA HHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCEEEECEEEEEECCCCHHHHCC NTEGQNIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCCCEEEEEECC RLVMQDAQKRNLGMVGIWSIARDLPGGTNLSPEFHGLTKEQAPKYAFSEIFAPFTKQ HHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 2661540; 10419961; 10760150 [H]