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The map label for this gene is yhdV

Identifier: 157162748

GI number: 157162748

Start: 3462733

End: 3462954

Strand: Direct

Name: yhdV

Synonym: EcHS_A3460

Alternate gene names: 157162748

Gene position: 3462733-3462954 (Clockwise)

Preceding gene: 157162747

Following gene: 157162749

Centisome position: 74.57

GC content: 53.15

Gene sequence:

>222_bases
ATGAAAAGATTAATTCCTGTGGCATTGCTCACCGCATTGCTGGCGGGCTGTGCTCACGATTCGCCCTGCGTTCCGGTTTA
TGACGATCAGGGGCGTCTGGTTCACACCAATACCTGTATGAAAGGCACAACTCAGGATAACTGGGAAACGGCTGGAGCTA
TTGCTGGCGGAGCAGCAGCTGTTGCTGGCCTGACGATGGGGATCATCGCTCTGTCGAAATAA

Upstream 100 bases:

>100_bases
ATTCCGCAAGATTTATAACCTCCGGTGATAAAATGGCATTCAGCTCGTTAATAAGAGAGTTAACTTATTAAACGTTAGCG
TTTATTACTGAGGTAACACC

Downstream 100 bases:

>100_bases
CTGAACAGGGCGCGAAGTTTCGCGCTCTGTTTAACGATACAGTATCTTTACATAAGATAAAATATTGCTATATTCTGCTG
GCTAATTCTCTGCTGATTTA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK

Sequences:

>Translated_73_residues
MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK
>Mature_73_residues
MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789667, Length=73, Percent_Identity=100, Blast_Score=149, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHDV_ECO57 (P64623)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D91146
- PIR:   H85991
- RefSeq:   NP_289836.1
- RefSeq:   NP_312167.1
- ProteinModelPortal:   P64623
- EnsemblBacteria:   EBESCT00000027040
- EnsemblBacteria:   EBESCT00000058923
- GeneID:   916012
- GeneID:   958707
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4628
- KEGG:   ecs:ECs4140
- GeneTree:   EBGT00050000011606
- HOGENOM:   HBG677370
- OMA:   SQGRLVH
- ProtClustDB:   CLSK880629
- BioCyc:   ECOL83334:ECS4140-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7452; Mature: 7452

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17d39650)-; HASH(0x17d79300)-;

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAA
CCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHH
VAGLTMGIIALSK
HHHHHHHHEEECH
>Mature Secondary Structure
MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAA
CCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHH
VAGLTMGIIALSK
HHHHHHHHEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796