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The map label for this gene is yhcO

Identifier: 157162717

GI number: 157162717

Start: 3429445

End: 3429717

Strand: Reverse

Name: yhcO

Synonym: EcHS_A3428

Alternate gene names: 157162717

Gene position: 3429717-3429445 (Counterclockwise)

Preceding gene: 157162718

Following gene: 157162714

Centisome position: 73.86

GC content: 42.86

Gene sequence:

>273_bases
ATGAATATTTATACCTTTGATTTTGATGAGATTGAGAGTCAGGAGGATTTTTATCGTGACTTTAGCCAAACCTTTGGTCT
GGCGAAAGATAAGGTACGCGATCTCGACTCACTATGGGATGTGTTAATGAACGATGTCCTGCCGCTACCACTTGAGATTG
AATTTGTTCATCTGGGAGAGAAAACGCGTCGCCGTTTTGGCGCGTTAATATTGCTGTTTGATGAGGCAGAGGAAGAGCTG
GAAGGGCATTTGCGTTTTAATGTTCGTCATTAG

Upstream 100 bases:

>100_bases
GATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTTTTCATGGCTATACTTAGCGATGCACGGCAGAACTCGCCGCG
AAACGTGACGGTGGCAACAG

Downstream 100 bases:

>100_bases
CGCAAAAAAAAGCCCCCGAACCGGGGGCAATATCGTCGGACAAGACGATGAGGGTTTATTTGTACAGTTCAGCCGTAGCG
TGCCAGGTGTCACCGCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEEL
EGHLRFNVRH

Sequences:

>Translated_90_residues
MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEEL
EGHLRFNVRH
>Mature_90_residues
MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEEL
EGHLRFNVRH

Specific function: Unknown

COG id: COG2732

COG function: function code K; Barstar, RNAse (barnase) inhibitor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the barstar family

Homologues:

Organism=Escherichia coli, GI1789635, Length=90, Percent_Identity=100, Blast_Score=181, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHCO_ECO57 (P64618)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C85988
- PIR:   H91142
- RefSeq:   NP_289807.1
- RefSeq:   NP_312139.1
- PDB:   2CX6
- PDBsum:   2CX6
- ProteinModelPortal:   P64618
- SMR:   P64618
- EnsemblBacteria:   EBESCT00000026560
- EnsemblBacteria:   EBESCT00000060175
- GeneID:   916038
- GeneID:   958674
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4598
- KEGG:   ecs:ECs4112
- GeneTree:   EBGT00050000011087
- HOGENOM:   HBG417089
- OMA:   FSEQFEL
- ProtClustDB:   CLSK880624
- BioCyc:   ECOL83334:ECS4112-MONOMER
- InterPro:   IPR000468

Pfam domain/function: PF01337 Barstar

EC number: NA

Molecular weight: Translated: 10796; Mature: 10796

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGE
CCEEECCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCH
KTRRRFGALILLFDEAEEELEGHLRFNVRH
HHHHHHCEEEEEECCCHHHCCCEEEEEECC
>Mature Secondary Structure
MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGE
CCEEECCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCH
KTRRRFGALILLFDEAEEELEGHLRFNVRH
HHHHHHCEEEEEECCCHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796