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The map label for this gene is sfsB

Identifier: 157162672

GI number: 157162672

Start: 3385836

End: 3386114

Strand: Direct

Name: sfsB

Synonym: EcHS_A3381

Alternate gene names: 157162672

Gene position: 3385836-3386114 (Clockwise)

Preceding gene: 157162671

Following gene: 157162674

Centisome position: 72.92

GC content: 50.54

Gene sequence:

>279_bases
ATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGA
ATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTG
CGAAGGCCCTGGGAACTGACCCCTGGGTTATCTGGCCATCACGCTACCATGATCCGCAGACCCATGAGTTTATCGACAGA
ACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGA

Upstream 100 bases:

>100_bases
TTACAGGAACTTTTTAGAGCAATCGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACT
AACTTAAGGAGTGAGGAAAG

Downstream 100 bases:

>100_bases
GTGGTCTGGCGGTAGCCCCGCGTACGGGGCTGCCAGCTTTCAGACGATTACTCGCCTTTCACACGCTCAATATTTGCACC
TAAAGCGCGCAGTTTGTCTT

Product: DNA-binding transcriptional regulator Nlp

Products: NA

Alternate protein names: Ner-like protein

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDR
TQLMRSYTKPKK

Sequences:

>Translated_92_residues
MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDR
TQLMRSYTKPKK
>Mature_92_residues
MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDR
TQLMRSYTKPKK

Specific function: This protein is involved in positive regulation of the metabolism of sugars

COG id: COG3423

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ner transcriptional regulatory family

Homologues:

Organism=Escherichia coli, GI1789579, Length=92, Percent_Identity=100, Blast_Score=192, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SFSB_ECO57 (P0ACH3)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C91137
- PIR:   F85982
- RefSeq:   NP_289762.1
- RefSeq:   NP_312094.1
- ProteinModelPortal:   P0ACH3
- SMR:   P0ACH3
- EnsemblBacteria:   EBESCT00000023900
- EnsemblBacteria:   EBESCT00000058525
- GeneID:   916088
- GeneID:   958630
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4551
- KEGG:   ecs:ECs4067
- GeneTree:   EBGT00050000011305
- HOGENOM:   HBG656019
- OMA:   GEWLIAD
- ProtClustDB:   PRK10344
- BioCyc:   ECOL83334:ECS4067-MONOMER
- GO:   GO:0006350
- InterPro:   IPR010982

Pfam domain/function: SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 10495; Mature: 10495

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTD
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCC
PWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK
CEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTD
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCC
PWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK
CEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796