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The map label for this gene is yraN [H]

Identifier: 157162633

GI number: 157162633

Start: 3346446

End: 3346715

Strand: Direct

Name: yraN [H]

Synonym: EcHS_A3340

Alternate gene names: 157162633

Gene position: 3346446-3346715 (Clockwise)

Preceding gene: 157162632

Following gene: 157162634

Centisome position: 72.07

GC content: 53.33

Gene sequence:

>270_bases
GTGAACGAGCGTGGCGGCGAGATCGATCTGATAATGCGTGAAGGCCGGACCACCATTTTTGTCGAGGTACGCTATCGCCG
CTCTGCGCTTTATGGCGGCGCGGCAGCCAGTGTGACCCGCAGCAAACAACACAAATTATTACAGACTGCCCGCTTGTGGC
TCGCGCGTCATAATGGGAGTTTTGATACTGTGGATTGCCGGTTCGATGTGGTAGCCTTCACCGGGAATGAGGTTGAGTGG
ATTAAGGATGCCTTTAATGACCACTCATAA

Upstream 100 bases:

>100_bases
TAGTCCCCGTCAGTTAACCACCAAACAGACCGGCGATGCGTGGGAAGCACAAGCGCGTCGCTGGCTGGAAGGCAAATGAC
TGCGGTTTATCGCCGCTAAC

Downstream 100 bases:

>100_bases
TTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAG
AGGCGCTTCCGGATGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEW
IKDAFNDHS

Sequences:

>Translated_89_residues
MNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEW
IKDAFNDHS
>Mature_89_residues
MNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEW
IKDAFNDHS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=89, Percent_Identity=98.876404494382, Blast_Score=184, Evalue=8e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 10190; Mature: 10190

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
CCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
FDTVDCRFDVVAFTGNEVEWIKDAFNDHS
CCEEEEEEEEEEEECCCHHHHHHHCCCCC
>Mature Secondary Structure
MNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
CCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
FDTVDCRFDVVAFTGNEVEWIKDAFNDHS
CCEEEEEEEEEEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA