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The map label for this gene is agaB [H]

Identifier: 157162623

GI number: 157162623

Start: 3335095

End: 3335571

Strand: Direct

Name: agaB [H]

Synonym: EcHS_A3330

Alternate gene names: 157162623

Gene position: 3335095-3335571 (Clockwise)

Preceding gene: 157162622

Following gene: 157162624

Centisome position: 71.82

GC content: 44.44

Gene sequence:

>477_bases
ATGAGCAGTCCAAATATTCTCTTAACCCGTATTGATAACCGTCTGGTTCATGGCCAGGTTGGCGTGACCTGGACATCCAC
CATCGGTGCAAATCTGCTGGTAGTCGTGGATGATGTTGTCGCTAACGATGATATTCAACAGAAATTAATGGGTATTACCG
CGGAAACCTACGGCTTTGGCATTCGTTTCTTTACTATCGAAAAAACCATTAACGTCATCGGCAAAGCTGCACCGCATCAG
AAGATCTTCCTGATTTGCCGTACGCCACAAACGGTACGTAAATTGGTAGAAGGTGGCATTGACCTGAAAGATGTCAACGT
CGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATCAGCAGTAAAGTTTATGTCGATGACCAGGATCTCGCGGACTTAC
GTTTTATTAAACAACGTGGCGTGAATGTTTTCATTCATGACGTCCCTGGCGATCAAAAAGAACAAATCCCTGACTAA

Upstream 100 bases:

>100_bases
AAGGAGATAACTAAACCTTAATAAATACATCAGTACAATATCGCAACAATAATATATTTAAAAAAATTATATTATTCAAC
TTTATGGTGAGGATTACACA

Downstream 100 bases:

>100_bases
ATCTAAAATCGCCTTAATATTGGTTTGAGGTAATAAAAATGCATGAAATAACCCTACTTCAGGGATTATCCCTGGCGGCG
TTAGTTTTTGTTCTGGGGAT

Product: N-acetylgalactosamine-specific PTS system transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Aga; PTS system N-acetylgalactosamine-specific EIIB component 1 [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQ
KIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQISSKVYVDDQDLADLRFIKQRGVNVFIHDVPGDQKEQIPD

Sequences:

>Translated_158_residues
MSSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQ
KIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQISSKVYVDDQDLADLRFIKQRGVNVFIHDVPGDQKEQIPD
>Mature_157_residues
SSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQK
IFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQISSKVYVDDQDLADLRFIKQRGVNVFIHDVPGDQKEQIPD

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789527, Length=158, Percent_Identity=98.1012658227848, Blast_Score=315, Evalue=6e-88,
Organism=Escherichia coli, GI87082217, Length=146, Percent_Identity=47.945205479452, Blast_Score=144, Evalue=3e-36,
Organism=Escherichia coli, GI1788120, Length=152, Percent_Identity=33.5526315789474, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 17587; Mature: 17456

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFG
CCCCCEEEEEECCEEEECCCCEEEECCCCCEEEEEEECHHCCCHHHHHHHCCCCHHCCCE
IRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQIS
EEEEEEHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCEEHHHHHHHHC
SKVYVDDQDLADLRFIKQRGVNVFIHDVPGDQKEQIPD
CEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHCCCCC
>Mature Secondary Structure 
SSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFG
CCCCEEEEEECCEEEECCCCEEEECCCCCEEEEEEECHHCCCHHHHHHHCCCCHHCCCE
IRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQIS
EEEEEEHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCEEHHHHHHHHC
SKVYVDDQDLADLRFIKQRGVNVFIHDVPGDQKEQIPD
CEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10931310; 9278503; 8932697 [H]