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The map label for this gene is yqjF

Identifier: 157162583

GI number: 157162583

Start: 3299475

End: 3299867

Strand: Direct

Name: yqjF

Synonym: EcHS_A3289

Alternate gene names: 157162583

Gene position: 3299475-3299867 (Clockwise)

Preceding gene: 157162582

Following gene: 157162584

Centisome position: 71.06

GC content: 49.11

Gene sequence:

>393_bases
ATGAAAAAATTAGAAGATGTTGGTGTACTGGTAGCACGCATTTTAATGCCGATTCTGTTTATTACCGCTGGCTGGGGAAA
AATTACTGGCTACGCGGGTACCCAACAATATATGGAAGCAATGGGCGTCCCGGGTTTTATGCTGCCGCTGGTGATTCTGC
TTGAGTTCGGTGGTGGTCTGGCAATCCTGTTCGGTTTCCTGACTCGCACCACTGCCCTGTTTACTGCGGGCTTTACGCTG
CTGACGGCATTTTTATTTCACAGCAACTTTGCTGAAGGCGTCAACTCGCTGATGTTCATGAAAAACCTGACAATTTCTGG
CGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAA

Upstream 100 bases:

>100_bases
CACCACGTTTATGATTCTCTCCATCGACAGCAACGACGCTAATACCGCGCCCTTGCACAAAAAAACAATCAGCAGCCTGA
GTGGCGCAGTGGAGAGTATG

Downstream 100 bases:

>100_bases
GCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACT
GATTGACGGCGTCTGGCATG

Product: putative inner membrane protein YqjF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTL
LTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW

Sequences:

>Translated_130_residues
MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTL
LTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
>Mature_130_residues
MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTL
LTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family

Homologues:

Organism=Escherichia coli, GI87082210, Length=130, Percent_Identity=100, Blast_Score=255, Evalue=8e-70,
Organism=Escherichia coli, GI145693171, Length=127, Percent_Identity=42.5196850393701, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJF_ECOLI (P42619)

Other databases:

- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_003650.1
- RefSeq:   NP_417572.2
- ProteinModelPortal:   P42619
- STRING:   P42619
- EnsemblBacteria:   EBESCT00000003466
- EnsemblBacteria:   EBESCT00000016654
- GeneID:   947608
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5850
- KEGG:   eco:b3101
- EchoBASE:   EB2601
- EcoGene:   EG12745
- eggNOG:   COG2259
- GeneTree:   EBGT00050000008284
- HOGENOM:   HBG706937
- OMA:   TAFIFHS
- ProtClustDB:   CLSK2312590
- BioCyc:   EcoCyc:G7615-MONOMER
- Genevestigator:   P42619
- InterPro:   IPR011637

Pfam domain/function: PF07681 DoxX

EC number: NA

Molecular weight: Translated: 14102; Mature: 14102

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1753b08c)-; HASH(0x174c2344)-; HASH(0x12fc86f0)-; HASH(0x16dfd1d8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGFMLPLVILLEFGGGL
CCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHH
AILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHH
SIDRLLNKKW
HHHHHHCCCH
>Mature Secondary Structure
MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGFMLPLVILLEFGGGL
CCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHH
AILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHH
SIDRLLNKKW
HHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503