| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is ygjK [H]
Identifier: 157162556
GI number: 157162556
Start: 3272332
End: 3274683
Strand: Direct
Name: ygjK [H]
Synonym: EcHS_A3262
Alternate gene names: 157162556
Gene position: 3272332-3274683 (Clockwise)
Preceding gene: 157162555
Following gene: 157162557
Centisome position: 70.47
GC content: 54.8
Gene sequence:
>2352_bases ATGAAAATAAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCGCTAACGCCGACAA TTATAAAAACGTGATTAACCGTACTGGCGCGCCGCAGTACATGAAGGATTACGATTACGACGATCACCAGCGTTTTAATC CGTTTTTCGATCTCGGAGCCTGGCATGGTCATCTGTTGCCAGACGGCCCTAACACCATGGGCGGCTTTCCGGGCGTTGCG CTGCTGACGGAAGAGTACATCAACTTTATGGCCAGCAATTTCGACCGCCTGACCGTCTGGCAGGACGGCAAGAAAGTCGA CTTTACGCTGGAGGCATACAGTATTCCCGGTGCGCTGGTGCAAAAACTGACAGCAAAAGATGTGCAAGTCGAAATGACTC TGCGCTTCGCCACGCCGCGCACGTCACTACTGGAAACCAAAATCACCAGCAATAAACCGCTGGATCTGGTGTGGGACGGC GAACTGCTGGAAAAACTGGAAGCGAAAGAAGGGAAACCGCTTTCCGATAAAACCATTGCTGGCGAATACCCTGACTATCA GCGCAAAATCAGCGCCACCCGTGATGGCCTGAAAGTCACCTTTGGCAAAGTGCGCGCCACCTGGGATCTGCTGACCTCCG GCGAATCGGAATATCAGGTGCATAAATCCCTGCCGGTGCAGACTGAAATCAACGGTAATCGCTTTACCAGTAAGGCGCAT ATCAACGGTTCGACGACGCTCTATACCACCTATTCCCATCTGCTGACCGCTCAGGAAGTTAGCAAAGAGCAAATGCAGAT CCGCGATATTCTGGCGCGTCCGGCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAGTATCTGAAGAAAGGGTTAA CCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCGCCT GGCGGCGCGGTGAAATACAACACCGTCACGCCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGA TACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGC AGATCCAGCCCGGCGACAGCGTGCGTCCGCAGGATGTGGGCTTTGTCCCCGACCTGATAGCGTGGAACCTTAGCCCCGAG CGTGGTGGCGATGGCGGCAACTGGAACGAACGTAATACCAAACCCAGCCTTGCCGCCTGGTCGGTGATGGAAGTGTATAA CGTCACCCAGGATAAAACCTGGCTGGCAGAGCTGTACCCGAAACTGGTGGCCTATCACGACTGGTGGTTACGTAACCGCG ATCACAACGGCAACGGCGTGCCGGAATATGGCGCGACCCGCGACAAAGCCCACAACACTGAGAGCGGCGAGATGCTGTTT ACGGTGAAAAAAGGCGATAAAGAAGAGACGCAGTCTGGGCTGAACAACTACGCCCGCGTGGTGGAGAAAGGCCAGTACGA CAGTCTGGAAATTCCGGCACAGGTTGCTGCATCGTGGGAATCGGGCCGTGATGACGCCGCCGTCTTTGGTTTTATCGACA AAGAACAGTTGGATAAATATGTCGCTAATGGCGGCAAACGTAGCGACTGGACGGTGAAATTCGCCGAAAACCGCAGTCAG GACGGAACGTTGCTGGGCTACTCGCTATTGCAGGAGTCGGTGGATCAGGCCAGCTATATGTACAGCGATAACCATTATCT GGCGGAGATGGCGACCATCCTCGGTAAGCCAGAAGAGGCCAAACGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACA TCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGC GCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAA TGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAACACCTTTGTCCCGCTGGGAACGGCGGCGTTAACCA ATCCGGCTTTTGGCGCTGATATCTACTGGCGTGGGCGCGTATGGGTGGATCAGTTCTGGTTTGGTCTGAAAGGGATGGAG CGTTACGGTTATCGTGATGATGCCCTGAAGCTGGCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGACC AATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATA TGTTGTATAACGATTTTTTCCGTAAGCAATAA
Upstream 100 bases:
>100_bases GCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTG GTAATAAGGACTGTAATTTC
Downstream 100 bases:
>100_bases TTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCA AGCGTTGCATCCGGCAACTG
Product: putative glycosyl hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 783; Mature: 783
Protein sequence:
>783_residues MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDG ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWLAELYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ
Sequences:
>Translated_783_residues MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDG ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWLAELYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ >Mature_783_residues MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDG ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWLAELYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789462, Length=783, Percent_Identity=99.6168582375479, Blast_Score=1625, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR001661 [H]
Pfam domain/function: PF01204 Trehalase [H]
EC number: NA
Molecular weight: Translated: 88334; Mature: 88334
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH QKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIA HHHHHCCEEEEEEEEECCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCC GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH CCCCCHHHHHHHCCCCCEEEEHHHHEEEHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW HHHHHCEEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH SVMEVYNVTQDKTWLAELYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME CCCCCCCCCEEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RKQ HCC >Mature Secondary Structure MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH QKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIA HHHHHCCEEEEEEEEECCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCC GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH CCCCCHHHHHHHCCCCCEEEEHHHHEEEHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW HHHHHCEEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH SVMEVYNVTQDKTWLAELYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME CCCCCCCCCEEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RKQ HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]