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The map label for this gene is ebgC

Identifier: 157162553

GI number: 157162553

Start: 3269166

End: 3269615

Strand: Direct

Name: ebgC

Synonym: EcHS_A3259

Alternate gene names: 157162553

Gene position: 3269166-3269615 (Clockwise)

Preceding gene: 157162552

Following gene: 157162554

Centisome position: 70.4

GC content: 45.56

Gene sequence:

>450_bases
ATGAGGATCATCGATAACTTAGAACAGTTCCGCCAGATTTACGCCTCTGGTAAGAAGTGGCAACGCTGCGTTGAAGCGAT
TGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCG
CGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATAT
GCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGACGAAACTGACCGCGAATATTTAAAAGGCTGCGGAGAAAC
CGTAGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCATATCGGTTTATCTGCAATAACGCGGTCAAAA
AAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAA

Upstream 100 bases:

>100_bases
TGCTGCCGGTTTCTGGCGGAGAAGCTACCGCGCAAAGCCTGGCGTCGTATGAGTTCGGCGCAGGGTTCTTTTCCACAAAT
TTGCACAGCGAGAATAAGCA

Downstream 100 bases:

>100_bases
CAACTACGGCGGCAAAAGGAGTTTGCCGCCACCGCTACCCTACACATTTTCGGAGATGTGTTATGTCTGATACCAAACGT
AATACAATCGGCAAATTCGG

Product: cryptic beta-D-galactosidase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEY
APKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK

Sequences:

>Translated_149_residues
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEY
APKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK
>Mature_149_residues
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEY
APKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK

Specific function: Required for full activity of the ebgA enzyme. Exact function not known

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789458, Length=149, Percent_Identity=100, Blast_Score=309, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EBGC_ECOL6 (P0AC74)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_755705.1
- ProteinModelPortal:   P0AC74
- EnsemblBacteria:   EBESCT00000045045
- GeneID:   1039995
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c3834
- GeneTree:   EBGT00050000010786
- HOGENOM:   HBG471012
- OMA:   NRCVEAI
- ProtClustDB:   PRK10202
- InterPro:   IPR004375
- Gene3D:   G3DSA:2.60.120.370

Pfam domain/function: PF04074 DUF386

EC number: 3.2.1.23

Molecular weight: Translated: 17457; Mature: 17457

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFT
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCHHHHH
GHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDI
CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCEEEEEEH
HEAYRFICNNAVKKVVLKVTIEDGYFHNK
HHHHHHHHHHHHHHEEEEEEECCCCCCCC
>Mature Secondary Structure
MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFT
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCHHHHH
GHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDI
CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCEEEEEEH
HEAYRFICNNAVKKVVLKVTIEDGYFHNK
HHHHHHHHHHHHHHEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157