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The map label for this gene is gspM [H]

Identifier: 157162429

GI number: 157162429

Start: 3139509

End: 3140045

Strand: Reverse

Name: gspM [H]

Synonym: EcHS_A3129

Alternate gene names: 157162429

Gene position: 3140045-3139509 (Counterclockwise)

Preceding gene: 157162430

Following gene: 157162427

Centisome position: 67.62

GC content: 54.19

Gene sequence:

>537_bases
ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGGCACA
ACACCTGGCGGGGCGTTCTCCGCGTGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGTCGGATATTACG
TCCTCATCTGGCAGCCGTTGAGCGAACGGATAGAACAACAGGAGACAATGTTGCAGCAACTGGTGGCGATGAACACCAGA
CTGAGGAGCGCCGCGCCGGATATTATTGCGGCGCGAAAATCCGCCACAACAACGCCTGCGCAGGTATCGCGGGTTATCAG
TGACAGTGCTTCCGCGCACTCGGTAGTCATCAAGCGGATAGCCGAGCGTGGGGAGAATATTCAGGTCTGGATAGATCCGG
TGGTGTTTAATGACCTGCTGAACTGGTTAAACGCGCTGGATGAAAAGTATGCGCTGCGGGTGACACAAATTGATGCCAGT
GCTGCTGAGAAGCCTGGGATGGTGAATGTGCAGCGGCTGGAGTTTGGACGGGGGTAA

Upstream 100 bases:

>100_bases
CTGCGTAGTGCACTGGCAACCGATTATGTTGTGCAACAGGACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGT
AAAGTTGCGGAGGAAATAAC

Downstream 100 bases:

>100_bases
AGTATCAGGAGATTAATATCAATAAAATTACTCTCGTTAACGTGGCGAGAGTAATTCCCCCAGACTTTATAAGCTAACTT
TTTTCGTGAAGGTTATTGTC

Product: putative general secretion pathway protein YghD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTR
LRSAAPDIIAARKSATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
AAEKPGMVNVQRLEFGRG

Sequences:

>Translated_178_residues
MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTR
LRSAAPDIIAARKSATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
AAEKPGMVNVQRLEFGRG
>Mature_178_residues
MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTR
LRSAAPDIIAARKSATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
AAEKPGMVNVQRLEFGRG

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3149

COG function: function code U; Type II secretory pathway, component PulM

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP M family [H]

Homologues:

Organism=Escherichia coli, GI1789339, Length=178, Percent_Identity=95.5056179775281, Blast_Score=352, Evalue=7e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007690
- InterPro:   IPR023229 [H]

Pfam domain/function: PF04612 GspM [H]

EC number: NA

Molecular weight: Translated: 20344; Mature: 20344

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHH
SERIEQQETMLQQLVAMNTRLRSAAPDIIAARKSATTTPAQVSRVISDSASAHSVVIKRI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
AERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDASAAEKPGMVNVQRLEFGRG
HHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECHHHCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHH
SERIEQQETMLQQLVAMNTRLRSAAPDIIAARKSATTTPAQVSRVISDSASAHSVVIKRI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
AERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDASAAEKPGMVNVQRLEFGRG
HHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECHHHCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]